Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A06p00840 A06 + View
C06p09480 C06 - View
A05p17960 A05 + View
C03p91710 C03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G1570 LG-10 + View
Aethionema arabicum Aa31LG8G1870 LG-8 + View
Arabidopsis thaliana AT1G53690 DNA directed RNA polymerase, 7 kDa subunit Protein of unknown function that is homologous to At5g41010%2C which encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II%2C IV and V%3B homologous to budding yeast RPB12. DNA directed RNA polymerase%2C 7 kDa subunit%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C DNA binding%3B INVOLVED IN: pollen tube growth%2C transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: leaf whorl%2C sperm cell%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: RNA polymerase Rbp10 (InterPro:IPR006591)%3B BEST Arabidopsis thaliana protein match is: DNA directed RNA polymerase%2C 7 kDa subunit (TAIR:AT5G41010.1)%3B Has 279 Blast hits to 279 proteins in 113 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 125%3B Fungi - 54%3B Plants - 68%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB04g17064 ChrB04 + View
Brassica carinata BcaC08g44099 ChrC08 + View
Brassica carinata BcaB07g33308 ChrB07 + View
Brassica carinata BcaC08g43550 ChrC08 - View
Brassica carinata BcaC01g01406 ChrC01 - View
Brassica oleracea BolC3t21490H C3 - View
Brassica rapa BraA08t32198Z A08 + View
Cardamine hirsuta CARHR043990 DNA-directed RNA polymerases I, II, and III subunit RPABC4 Chr1 - View
Carica papaya Cpa.g.sc25.208 supercontig_25 + View
Capsella rubella Carub.0001s4296 K03009 - DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RPB12, POLR2K) scaffold_1 - View
Eutrema salsugineum Thhalv10011934m.g scaffold_7 + View
Gossypium hirsutum Gohir.D06G202700 PTHR12056//PTHR12056:SF2 - DNA-DIRECTED RNA POLYMERASES I, II, AND III // DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4 D06 + View
Gossypium hirsutum Gohir.A06G195100 K03009 - DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RPB12, POLR2K) A06 + View
Gossypium raimondii Gorai.010G236600 Chr10 + View
Schrenkiella parvula Sp1g40220 PTHR12056//PTHR12056:SF2 - DNA-DIRECTED RNA POLYMERASES I, II, AND III // DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4 ch1-2 - View
Solanum tuberosum PGSC0003DMG400021289 DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide ST4.03ch10 + View
Tarenaya hassleriana THA.LOC104810404 DNA-directed RNA polymerases II%2C IV and V subunit 12-like NW_010965216.1 + View
Tarenaya hassleriana THA.LOC104822608 DNA-directed RNA polymerases II%2C IV and V subunit 12 NW_010966725.1 - View