Functional Clusters
Cluster information
- Cluster identifier CH_ath_174
- Chromosome Chr4
- E-value 0.0000018955
- Data type MapMan
- Data identifier 16.2.1.5.4
- Data description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39)
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Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D003820 | 181 | 3 | 3 | 97 |
| HOM05D000772 | 762 | 5 | 1 | 96 |
| HOM05D005528 | 139 | 3 | 2 | 92 |
| HOM05D002742 | 252 | 3 | 1 | 99 |
| HOM05D002698 | 255 | 2 | 1 | 92 |
| HOM05D003073 | 223 | 1 | 1 | 94 |
| HOM05D002455 | 277 | 3 | 1 | 98 |
| HOM05D000827 | 720 | 9 | 1 | 100 |
| HOM05D007829 | 86 | 1 | 1 | 72 |
| HOM05D002783 | 248 | 3 | 1 | 98 |
| HOM05D000007 | 10023 | 7 | 1 | 88 |
| HOM05D024885 | 5 | 3 | 1 | 3 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | AT4G07070 | RNA gene | |
| X | AT4G07075 | RNA gene | |
| X | AT4G07080 | RNA gene | |
| X | AT4G07085 | RNA gene | |
| V | AT4G22285 | Coding gene | HOM05D003820 |
| X | AT4G22290 | Coding gene | HOM05D000772 |
| X | AT4G22300 | Coding gene | HOM05D005528 |
| X | AT4G22305 | Coding gene | HOM05D005528 |
| X | AT4G22310 | Coding gene | HOM05D002742 |
| X | AT4G22320 | Coding gene | HOM05D002698 |
| X | AT4G22330 | Coding gene | HOM05D003073 |
| X | AT4G22340 | Coding gene | HOM05D002455 |
| V | AT4G22350 | Coding gene | HOM05D003820 |
| X | AT4G22360 | Coding gene | HOM05D000827 |
| X | AT4G22370 | Coding gene | HOM05D007829 |
| X | AT4G22380 | Coding gene | HOM05D002783 |
| X | AT4G22390 | Coding gene | HOM05D000007 |
| X | AT4G22400 | Coding gene | HOM05D024885 |
| V | AT4G22410 | Coding gene | HOM05D003820 |
| X | AT4TE54500 | Transposon | |
| X | AT4TE54570 | Transposon | |
| X | ath-miR8176 | RNA gene |