Gene: AT4G22300
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G22300
- Transcript Identifier AT4G22300.1
- Gene Type Coding gene
- Location Chr4 : 11787560-11789252 : negative
Gene Family Information
- ID HOM05D005528
- #Genes/#Species 139/92
- Phylogenetic origin
- ID ORTHO05D007066
- #Genes/#Species 135/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G22300.1
- symbol SOBER1
- full_name SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1
- uniprot Q8GYK2
Descriptions
- Description carboxylesterase
- Computational description SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: defense response, incompatible interaction, regulation of plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G22305.1); Has 4896 Blast hits to 2727 proteins in 833 species: Archae - 28; Bacteria - 2331; Metazoa - 701; Fungi - 503; Plants - 344; Viruses - 0; Other Eukaryotes - 989 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002084 | IBA | Gene Ontology | protein depalmitoylation | 1 |
| GO:0006629 | IEA | GOA Database | lipid metabolic process | |
| GO:0006631 | IEA | GOA Database | fatty acid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0052689 | IBA | Gene Ontology | carboxylic ester hydrolase activity | 1 |
| GO:0008474 | IBA | Gene Ontology | palmitoyl-(protein) hydrolase activity | 1 |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016787 | IEA | InterPro | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.9.2.6 | External stimuli response.pathogen.effector-triggered immunity (ETI) network.immunity suppressor protein (SOBER/TIPSY) |