Functional clusters
Information
- Type InterPro
- Description Pre-mRNA-splicing factor Syf1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_135 | 4 | 5 | 0.0000000565711 |
| Amborella trichopoda | AmTr_v1.0_scaffold00060 | 5 | CH_atr_121 | 4 | 5 | 0.000000000526379 |
| Brassica carinata | ChrC01 | 5 | CH_bca_1255 | 3 | 7 | 0.0000551362 |
| Brassica oleracea | C1 | 5 | CH_bol_864 | 3 | 15 | 0.00070478 |
| Davidia involucrata | GWHABJS00000020 | 5 | CH_din_834 | 2 | 2 | 0.000750188 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_444 | 3 | 4 | 0.00000458003 |
| Helianthus annuus | HanXRQChr01 | 5 | CH_han_954 | 4 | 68 | 0.00019013 |
| Lupinus albus | Lalb_Chr24 | 5 | CH_lal_199 | 3 | 3 | 0.00000014461 |
| Malus domestica | Chr08 | 5 | CH_mdo_726 | 3 | 8 | 0.0000101415 |
| Manihot esculenta | Chromosome02 | 5 | CH_mes_697 | 2 | 2 | 0.000610631 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_202 | 3 | 3 | 0.000000121813 |
| Olea europaea | chr8 | 5 | CH_oeu_363 | 2 | 2 | 0.0000533789 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_702 | 3 | 3 | 0.000000867742 |
| Rhododendron simsii | chr05 | 5 | CH_rsi_553 | 4 | 30 | 0.00000725104 |
| Sequoiadendron giganteum | HRSCAF_1 | 5 | CH_sgi_1091 | 3 | 3 | 0.000000124594 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_887 | 3 | 28 | 0.000814154 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_135 | 4 | 5 | 0.0000000565711 |
| Amborella trichopoda | AmTr_v1.0_scaffold00060 | 6 | CH_atr_121 | 4 | 5 | 0.000000000526379 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1255 | 3 | 7 | 0.0000551362 |
| Brassica oleracea | C1 | 6 | CH_bol_864 | 3 | 15 | 0.00070478 |
| Davidia involucrata | GWHABJS00000020 | 6 | CH_din_834 | 2 | 2 | 0.000750188 |
| Fragaria x ananassa | Fvb3-2 | 6 | CH_fan_1049 | 4 | 59 | 0.000447025 |
| Fragaria x ananassa | Fvb7-4 | 6 | CH_fan_650 | 3 | 4 | 0.0000134424 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_444 | 3 | 4 | 0.00000458003 |
| Helianthus annuus | HanXRQChr01 | 6 | CH_han_954 | 4 | 68 | 0.00019013 |
| Lupinus albus | Lalb_Chr24 | 6 | CH_lal_199 | 3 | 3 | 0.00000014461 |
| Malus domestica | Chr08 | 6 | CH_mdo_726 | 3 | 8 | 0.0000101415 |
| Manihot esculenta | Chromosome02 | 6 | CH_mes_697 | 2 | 2 | 0.000610631 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_202 | 3 | 3 | 0.000000121813 |
| Olea europaea | chr8 | 6 | CH_oeu_363 | 2 | 2 | 0.0000533789 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_702 | 3 | 3 | 0.000000867742 |
| Rhododendron simsii | chr05 | 6 | CH_rsi_553 | 4 | 30 | 0.00000725104 |
| Sequoiadendron giganteum | HRSCAF_1 | 6 | CH_sgi_1091 | 3 | 3 | 0.000000124594 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_887 | 3 | 28 | 0.000814154 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |