Functional clusters
Information
- Type InterPro
- Description Beta-glucanase/XTH
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00065 | 5 | CH_atr_126 | 5 | 7 | 0.00000000106413 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1161 | 3 | 3 | 0.000259137 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_833 | 4 | 7 | 0.0000159447 |
| Davidia involucrata | GWHABJS00000085 | 5 | CH_din_87 | 6 | 6 | 0.0000000000000984713 |
| Davidia involucrata | GWHABJS00000085 | 5 | CH_din_88 | 6 | 6 | 0.0000000000000984713 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_272 | 4 | 6 | 0.000000146062 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_359 | 5 | 22 | 0.000000399674 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_6 | 22 | 26 | 2.39606e-54 |
| Marchantia polymorpha | scaffold_66 | 5 | CH_mpo_46 | 5 | 5 | 0.00000000107446 |
| Medicago truncatula | chr4 | 5 | CH_mtr_623 | 4 | 6 | 0.000000423141 |
| Oryza sativa ssp. japonica | chr06 | 5 | CH_osa_158 | 5 | 7 | 0.000000000290465 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_84 | 9 | 13 | 1.05222e-21 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_64 | 9 | 10 | 2.23601e-22 |
| Simmondsia chinensis | GWHAASQ00000018 | 5 | CH_sci_328 | 4 | 17 | 0.0000892402 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_1 | 30 | 34 | 2.30482e-70 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_113 | 18 | 71 | 1.58326e-26 |
| Vitis vinifera | chr11 | 5 | CH_vvi_11 | 15 | 19 | 6.28686e-37 |
| Vitis vinifera | chr5 | 5 | CH_vvi_660 | 4 | 20 | 0.000415508 |
| Amborella trichopoda | AmTr_v1.0_scaffold00065 | 6 | CH_atr_126 | 5 | 7 | 0.00000000106413 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1161 | 3 | 3 | 0.000259137 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_833 | 4 | 7 | 0.0000159447 |
| Davidia involucrata | GWHABJS00000085 | 6 | CH_din_87 | 6 | 6 | 0.0000000000000984713 |
| Davidia involucrata | GWHABJS00000085 | 6 | CH_din_88 | 6 | 6 | 0.0000000000000984713 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_272 | 4 | 6 | 0.000000146062 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_359 | 5 | 22 | 0.000000399674 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_6 | 22 | 26 | 2.39606e-54 |
| Marchantia polymorpha | scaffold_66 | 6 | CH_mpo_46 | 5 | 5 | 0.00000000107446 |
| Medicago truncatula | chr4 | 6 | CH_mtr_623 | 4 | 6 | 0.000000423141 |
| Oryza sativa ssp. japonica | chr06 | 6 | CH_osa_158 | 5 | 7 | 0.000000000290465 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_84 | 9 | 13 | 1.05222e-21 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_64 | 9 | 10 | 2.23601e-22 |
| Simmondsia chinensis | GWHAASQ00000018 | 6 | CH_sci_328 | 4 | 17 | 0.0000892402 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_1 | 30 | 34 | 2.30482e-70 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_113 | 18 | 71 | 1.58326e-26 |
| Vitis vinifera | chr11 | 6 | CH_vvi_11 | 15 | 19 | 6.28686e-37 |
| Vitis vinifera | chr5 | 6 | CH_vvi_660 | 4 | 20 | 0.000415508 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |