Functional clusters

Information

  • Type InterPro
  • Description Nucleoporin peptidase S59-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_689 2 2 0.000660044
Brassica carinata ChrC05 5 CH_bca_266 5 35 0.000000000401755
Camellia sinensis var. sinensis Chr2 5 CH_camsi_55 8 14 9.79515e-21
Camellia sinensis var. sinensis Chr3 5 CH_camsi_707 4 19 0.00000265804
Lonicera japonica GWHAAZE00000005 5 CH_lonja_526 3 5 0.00000107577
Malus domestica Chr06 5 CH_mdo_137 5 8 0.000000000000218826
Medicago truncatula chr1 5 CH_mtr_1094 2 2 0.000123259
Olea europaea scaffold948 5 CH_oeu_123 3 3 0.0000000427407
Physcomitrium patens Chr26 5 CH_ppa_58 3 5 0.000000225243
Prunus persica Pp05 5 CH_ppe_369 3 5 0.000000333845
Pisum sativum chr3LG5 5 CH_psa_771 2 3 0.000938886
Papaver somniferum NC_039359.1 5 CH_pso_1209 2 2 0.000630822
Quercus lobata CM012294 5 CH_qlo_698 3 3 0.0000000159937
Sechium edule LG05 5 CH_sed_469 2 2 0.000428052
Sequoiadendron giganteum chr6 5 CH_sgi_944 4 11 0.0000000144098
Solanum lycopersicum SL4.0ch02 5 CH_sly_963 2 2 0.000880411
Solanum pennellii Spenn-ch02 5 CH_spe_860 2 2 0.000667186
Solanum tuberosum ST4.03ch02 5 CH_stu_202 4 6 0.0000000000908323
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_212 3 3 0.0000000859546
Vanilla planifolia CM028156.1 5 CH_vpl_723 2 2 0.00073888
Vitis vinifera chr14 5 CH_vvi_705 2 2 0.000456378
Arabidopsis lyrata scaffold_2 6 CH_aly_689 2 2 0.000660044
Brassica carinata ChrC05 6 CH_bca_266 5 35 0.000000000401755
Camellia sinensis var. sinensis Chr2 6 CH_camsi_55 8 14 9.79515e-21
Camellia sinensis var. sinensis Chr3 6 CH_camsi_707 4 19 0.00000265804
Lonicera japonica GWHAAZE00000005 6 CH_lonja_526 3 5 0.00000107577
Malus domestica Chr06 6 CH_mdo_137 5 8 0.000000000000218826
Medicago truncatula chr1 6 CH_mtr_1094 2 2 0.000123259
Olea europaea scaffold948 6 CH_oeu_123 3 3 0.0000000427407
Physcomitrium patens Chr26 6 CH_ppa_58 3 5 0.000000225243
Prunus persica Pp05 6 CH_ppe_369 3 5 0.000000333845
Pisum sativum chr3LG5 6 CH_psa_771 2 3 0.000938886
Papaver somniferum NC_039359.1 6 CH_pso_1209 2 2 0.000630822
Quercus lobata CM012294 6 CH_qlo_698 3 3 0.0000000159937
Sechium edule LG05 6 CH_sed_469 2 2 0.000428052
Sequoiadendron giganteum chr6 6 CH_sgi_944 4 11 0.0000000144098
Solanum lycopersicum SL4.0ch02 6 CH_sly_963 2 2 0.000880411
Solanum pennellii Spenn-ch02 6 CH_spe_860 2 2 0.000667186
Solanum tuberosum ST4.03ch02 6 CH_stu_202 4 6 0.0000000000908323
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_212 3 3 0.0000000859546
Vanilla planifolia CM028156.1 6 CH_vpl_723 2 2 0.00073888
Vitis vinifera chr14 6 CH_vvi_705 2 2 0.000456378

Available child term results

Ontology identifier Description Number of clusters
IPR037637 Nuclear pore complex protein NUP98-NUP96 28

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001