Functional clusters
Information
- Type InterPro
- Description Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_154 | 5 | 5 | 0.00000000119897 |
| Actinidia chinensis | Lachesis_group3 | 5 | CH_ach_419 | 3 | 3 | 0.000263986 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_62 | 10 | 23 | 0.00000000000000870185 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_201 | 4 | 4 | 0.00000150377 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 5 | CH_arhy_1080 | 3 | 3 | 0.000290165 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_1081 | 3 | 3 | 0.000290165 |
| Arabidopsis thaliana | Chr4 | 5 | CH_ath_24 | 13 | 43 | 1.59869e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00071 | 5 | CH_atr_532 | 3 | 3 | 0.000358028 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_247 | 4 | 4 | 0.000000575128 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_313 | 4 | 6 | 0.00000859872 |
| Capsicum annuum | PGAv.1.6.scaffold1094 | 5 | CH_can_289 | 5 | 6 | 0.0000000867588 |
| Cicer arietinum L. | Ca_LG8_v3 | 5 | CH_car_192 | 3 | 3 | 0.0000706032 |
| Carpinus fangiana | Cfa05 | 5 | CH_cfa_458 | 3 | 3 | 0.000201556 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_56 | 11 | 22 | 4.25392e-17 |
| Citrullus lanatus | CG_Chr06 | 5 | CH_cla_252 | 3 | 3 | 0.000156347 |
| Carica papaya | supercontig_58 | 5 | CH_cpa_180 | 4 | 4 | 0.000000697892 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 5 | CH_cqu_142 | 6 | 6 | 0.00000000000916882 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 5 | CH_cqu_969 | 3 | 3 | 0.000649693 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3422 | 5 | CH_cqu_970 | 3 | 3 | 0.000649693 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_108 | 6 | 8 | 0.0000000000400226 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_674 | 3 | 3 | 0.000267482 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_789 | 4 | 4 | 0.000000584442 |
| Gossypium hirsutum | A09 | 5 | CH_ghi_716 | 4 | 4 | 0.0000118244 |
| Gossypium hirsutum | D09 | 5 | CH_ghi_717 | 4 | 4 | 0.0000118244 |
| Gossypium raimondii | Chr06 | 5 | CH_gra_349 | 4 | 4 | 0.00000575889 |
| Hydrangea macrophylla | Hma1.2p1_1014F.1 | 5 | CH_hma_498 | 3 | 3 | 0.000262676 |
| Lotus japonicus | Contig00222 | 5 | CH_lja_315 | 4 | 5 | 0.00000665328 |
| Malus domestica | Chr13 | 5 | CH_mdo_1164 | 3 | 3 | 0.000318037 |
| Malus domestica | Chr16 | 5 | CH_mdo_1165 | 3 | 3 | 0.000318037 |
| Nelumbo nucifera | chr7 | 5 | CH_nnu_124 | 7 | 26 | 0.00000000238675 |
| Petunia axillaris | Peaxi162Scf00092 | 5 | CH_pax_79 | 6 | 6 | 0.0000000000210269 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_276 | 5 | 9 | 0.000000972921 |
| Prunus persica | Pp01 | 5 | CH_ppe_404 | 4 | 4 | 0.00000121011 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_588 | 3 | 3 | 0.000233287 |
| Papaver somniferum | NW_020620492.1 | 5 | CH_pso_629 | 4 | 5 | 0.0000024779 |
| Populus trichocarpa | Chr10 | 5 | CH_ptr_461 | 4 | 5 | 0.00000807735 |
| Populus trichocarpa | Chr11 | 5 | CH_ptr_765 | 3 | 3 | 0.000629335 |
| Populus trichocarpa | Chr08 | 5 | CH_ptr_766 | 3 | 3 | 0.000629335 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_352 | 4 | 4 | 0.00000591155 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_910 | 3 | 3 | 0.000421796 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_619 | 3 | 3 | 0.000209677 |
| Solanum pennellii | Spenn-ch09 | 5 | CH_spe_178 | 5 | 5 | 0.00000000179454 |
| Trochodendron aralioides | group2 | 5 | CH_tar_41 | 8 | 8 | 2.0777e-17 |
| Trochodendron aralioides | group15 | 5 | CH_tar_458 | 4 | 7 | 0.0000322381 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_719 | 3 | 3 | 0.00063628 |
| Tarenaya hassleriana | NW_010964923.1 | 5 | CH_tha_359 | 3 | 3 | 0.000889048 |
| Tripterygium wilfordii | NC_052232.1 | 5 | CH_twi_242 | 4 | 4 | 0.00000258263 |
| Tripterygium wilfordii | NC_052250.1 | 5 | CH_twi_297 | 4 | 5 | 0.0000128834 |
| Vitis vinifera | chr13_random | 5 | CH_vvi_297 | 4 | 4 | 0.000000235505 |
| Vitis vinifera | chr16 | 5 | CH_vvi_634 | 5 | 40 | 0.000241583 |
| Vitis vinifera | chr2 | 5 | CH_vvi_99 | 10 | 43 | 0.00000000000000574921 |
| Acer truncatum | chr4 | 6 | CH_acertr_154 | 5 | 5 | 0.00000000119897 |
| Actinidia chinensis | Lachesis_group3 | 6 | CH_ach_419 | 3 | 3 | 0.000263986 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_62 | 10 | 23 | 0.00000000000000870185 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_201 | 4 | 4 | 0.00000150377 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 6 | CH_arhy_1080 | 3 | 3 | 0.000290165 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_1081 | 3 | 3 | 0.000290165 |
| Arabidopsis thaliana | Chr4 | 6 | CH_ath_24 | 13 | 43 | 1.59869e-21 |
| Amborella trichopoda | AmTr_v1.0_scaffold00071 | 6 | CH_atr_532 | 3 | 3 | 0.000358028 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_247 | 4 | 4 | 0.000000575128 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_313 | 4 | 6 | 0.00000859872 |
| Capsicum annuum | PGAv.1.6.scaffold1094 | 6 | CH_can_289 | 5 | 6 | 0.0000000867588 |
| Cicer arietinum L. | Ca_LG8_v3 | 6 | CH_car_192 | 3 | 3 | 0.0000706032 |
| Carpinus fangiana | Cfa05 | 6 | CH_cfa_458 | 3 | 3 | 0.000201556 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_56 | 11 | 22 | 4.25392e-17 |
| Citrullus lanatus | CG_Chr06 | 6 | CH_cla_252 | 3 | 3 | 0.000156347 |
| Carica papaya | supercontig_58 | 6 | CH_cpa_180 | 4 | 4 | 0.000000697892 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 6 | CH_cqu_142 | 6 | 6 | 0.00000000000916882 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 6 | CH_cqu_969 | 3 | 3 | 0.000649693 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3422 | 6 | CH_cqu_970 | 3 | 3 | 0.000649693 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_108 | 6 | 8 | 0.0000000000400226 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_674 | 3 | 3 | 0.000267482 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_789 | 4 | 4 | 0.000000584442 |
| Gossypium hirsutum | A09 | 6 | CH_ghi_716 | 4 | 4 | 0.0000118244 |
| Gossypium hirsutum | D09 | 6 | CH_ghi_717 | 4 | 4 | 0.0000118244 |
| Gossypium raimondii | Chr06 | 6 | CH_gra_349 | 4 | 4 | 0.00000575889 |
| Hydrangea macrophylla | Hma1.2p1_1014F.1 | 6 | CH_hma_498 | 3 | 3 | 0.000262676 |
| Lotus japonicus | Contig00222 | 6 | CH_lja_315 | 4 | 5 | 0.00000665328 |
| Malus domestica | Chr13 | 6 | CH_mdo_1164 | 3 | 3 | 0.000318037 |
| Malus domestica | Chr16 | 6 | CH_mdo_1165 | 3 | 3 | 0.000318037 |
| Nelumbo nucifera | chr7 | 6 | CH_nnu_124 | 7 | 26 | 0.00000000238675 |
| Petunia axillaris | Peaxi162Scf00092 | 6 | CH_pax_79 | 6 | 6 | 0.0000000000210269 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_276 | 5 | 9 | 0.000000972921 |
| Prunus persica | Pp01 | 6 | CH_ppe_404 | 4 | 4 | 0.00000121011 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_588 | 3 | 3 | 0.000233287 |
| Papaver somniferum | NW_020620492.1 | 6 | CH_pso_629 | 4 | 5 | 0.0000024779 |
| Populus trichocarpa | Chr10 | 6 | CH_ptr_461 | 4 | 5 | 0.00000807735 |
| Populus trichocarpa | Chr11 | 6 | CH_ptr_765 | 3 | 3 | 0.000629335 |
| Populus trichocarpa | Chr08 | 6 | CH_ptr_766 | 3 | 3 | 0.000629335 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_352 | 4 | 4 | 0.00000591155 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_910 | 3 | 3 | 0.000421796 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_619 | 3 | 3 | 0.000209677 |
| Solanum pennellii | Spenn-ch09 | 6 | CH_spe_178 | 5 | 5 | 0.00000000179454 |
| Trochodendron aralioides | group2 | 6 | CH_tar_41 | 8 | 8 | 2.0777e-17 |
| Trochodendron aralioides | group15 | 6 | CH_tar_458 | 4 | 7 | 0.0000322381 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_719 | 3 | 3 | 0.00063628 |
| Tarenaya hassleriana | NW_010964923.1 | 6 | CH_tha_359 | 3 | 3 | 0.000889048 |
| Tripterygium wilfordii | NC_052232.1 | 6 | CH_twi_242 | 4 | 4 | 0.00000258263 |
| Tripterygium wilfordii | NC_052250.1 | 6 | CH_twi_297 | 4 | 5 | 0.0000128834 |
| Vitis vinifera | chr13_random | 6 | CH_vvi_297 | 4 | 4 | 0.000000235505 |
| Vitis vinifera | chr16 | 6 | CH_vvi_634 | 5 | 40 | 0.000241583 |
| Vitis vinifera | chr2 | 6 | CH_vvi_99 | 10 | 43 | 0.00000000000000574921 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |