Functional clusters

Information

  • Type InterPro
  • Description Non-specific lipid-transfer protein-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 5 CH_aly_288 3 4 0.000000914792
Arabidopsis thaliana Chr5 5 CH_ath_305 3 10 0.00000516889
Arabidopsis thaliana Chr5 5 CH_ath_602 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00005 5 CH_atr_167 4 8 0.0000000132564
Amborella trichopoda AmTr_v1.0_scaffold00053 5 CH_atr_193 4 10 0.0000000397535
Brassica rapa A03 5 CH_bra_602 2 2 0.000901558
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_522 2 2 0.000827917
Camellia sinensis var. sinensis Chr3 5 CH_camsi_205 4 4 0.00000000000433905
Citrus clementina scaffold_2 5 CH_ccl_173 5 13 0.0000000000550064
Cardamine hirsuta Chr8 5 CH_chi_260 3 3 0.000000143334
Citrullus lanatus CG_Chr09 5 CH_cla_278 2 2 0.000266134
Chenopodium quinoa C_Quinoa_Scaffold_1237 5 CH_cqu_821 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2185 5 CH_cqu_822 2 2 0.000284293
Capsella rubella scaffold_8 5 CH_cru_159 4 6 0.00000000123098
Cucumis sativus L. chr7 5 CH_csa_478 2 3 0.000751231
Durio zibethinus NW_019168159.1 5 CH_dzi_479 2 2 0.000278093
Magnolia biondii Chr07 5 CH_mbi_1257 2 3 0.00087414
Malus domestica Chr02 5 CH_mdo_1297 2 2 0.000568817
Punica granatum NC_045127.1 5 CH_pgr_550 2 2 0.000450214
Pisum sativum chr7LG7 5 CH_psa_222 3 3 0.000000081633
Papaver somniferum NC_039368.1 5 CH_pso_148 7 51 0.0000000000000384775
Papaver somniferum NC_039366.1 5 CH_pso_329 4 6 0.00000000199403
Populus trichocarpa Chr09 5 CH_ptr_208 4 6 0.00000000109467
Quercus lobata 4 5 CH_qlo_156 7 8 2.04792e-20
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1312 2 2 0.000398653
Rhododendron simsii chr12 5 CH_rsi_408 3 3 0.00000012493
Salix brachista GWHAAZH00000009 5 CH_sbr_137 4 4 0.0000000000525497
Sequoiadendron giganteum chr1 5 CH_sgi_1601 2 2 0.0000487151
Arabidopsis lyrata scaffold_8 6 CH_aly_288 3 4 0.000000914792
Arabidopsis thaliana Chr5 6 CH_ath_305 3 10 0.00000516889
Arabidopsis thaliana Chr5 6 CH_ath_602 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00005 6 CH_atr_167 4 8 0.0000000132564
Amborella trichopoda AmTr_v1.0_scaffold00053 6 CH_atr_193 4 10 0.0000000397535
Brassica rapa A03 6 CH_bra_602 2 2 0.000901558
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_522 2 2 0.000827917
Camellia sinensis var. sinensis Chr3 6 CH_camsi_205 4 4 0.00000000000433905
Citrus clementina scaffold_2 6 CH_ccl_173 5 13 0.0000000000550064
Cardamine hirsuta Chr8 6 CH_chi_260 3 3 0.000000143334
Citrullus lanatus CG_Chr09 6 CH_cla_278 2 2 0.000266134
Chenopodium quinoa C_Quinoa_Scaffold_1237 6 CH_cqu_821 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2185 6 CH_cqu_822 2 2 0.000284293
Capsella rubella scaffold_8 6 CH_cru_159 4 6 0.00000000123098
Cucumis sativus L. chr7 6 CH_csa_478 2 3 0.000751231
Durio zibethinus NW_019168159.1 6 CH_dzi_479 2 2 0.000278093
Magnolia biondii Chr07 6 CH_mbi_1257 2 3 0.00087414
Malus domestica Chr02 6 CH_mdo_1297 2 2 0.000568817
Punica granatum NC_045127.1 6 CH_pgr_550 2 2 0.000450214
Pisum sativum chr7LG7 6 CH_psa_222 3 3 0.000000081633
Papaver somniferum NC_039368.1 6 CH_pso_148 7 51 0.0000000000000384775
Papaver somniferum NC_039366.1 6 CH_pso_329 4 6 0.00000000199403
Populus trichocarpa Chr09 6 CH_ptr_208 4 6 0.00000000109467
Quercus lobata 4 6 CH_qlo_156 7 8 2.04792e-20
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1312 2 2 0.000398653
Rhododendron simsii chr12 6 CH_rsi_408 3 3 0.00000012493
Salix brachista GWHAAZH00000009 6 CH_sbr_137 4 4 0.0000000000525497
Sequoiadendron giganteum chr1 6 CH_sgi_1601 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001