Functional clusters
Information
- Type InterPro
- Description Phospholipase D family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 5 | CH_arhy_356 | 5 | 8 | 0.000000000713722 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1077 | 3 | 3 | 0.0000126285 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1078 | 3 | 3 | 0.0000126285 |
| Brassica carinata | ChrB01 | 5 | CH_bca_29 | 8 | 9 | 2.60722e-21 |
| Brassica carinata | ChrC03 | 5 | CH_bca_372 | 4 | 4 | 0.00000000620901 |
| Brassica napus | C03 | 5 | CH_bna_74 | 6 | 6 | 3.02262e-16 |
| Camellia sinensis var. sinensis | Chr12 | 5 | CH_camsi_554 | 4 | 8 | 0.000000302205 |
| Coffea canephora | chr10 | 5 | CH_ccan_579 | 2 | 2 | 0.000281088 |
| Carica papaya | supercontig_50 | 5 | CH_cpa_210 | 3 | 3 | 0.00000298254 |
| Glycine max | Gm15 | 5 | CH_gma_498 | 3 | 3 | 0.0000117904 |
| Malus domestica | Chr08 | 5 | CH_mdo_277 | 4 | 4 | 0.000000000979163 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_133 | 4 | 5 | 0.00000000398903 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_264 | 3 | 3 | 0.00000236666 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_249 | 4 | 8 | 0.000000263516 |
| Quercus lobata | 11 | 5 | CH_qlo_485 | 5 | 6 | 0.0000000000379549 |
| Quercus lobata | 6 | 5 | CH_qlo_656 | 4 | 4 | 0.00000000980653 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_520 | 4 | 9 | 0.0000000435426 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_700 | 4 | 4 | 0.000000000473454 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 6 | CH_arhy_356 | 5 | 8 | 0.000000000713722 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1077 | 3 | 3 | 0.0000126285 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1078 | 3 | 3 | 0.0000126285 |
| Brassica carinata | ChrB01 | 6 | CH_bca_29 | 8 | 9 | 2.60722e-21 |
| Brassica carinata | ChrC03 | 6 | CH_bca_372 | 4 | 4 | 0.00000000620901 |
| Brassica napus | C03 | 6 | CH_bna_74 | 6 | 6 | 3.02262e-16 |
| Camellia sinensis var. sinensis | Chr12 | 6 | CH_camsi_554 | 4 | 8 | 0.000000302205 |
| Coffea canephora | chr10 | 6 | CH_ccan_579 | 2 | 2 | 0.000281088 |
| Carica papaya | supercontig_50 | 6 | CH_cpa_210 | 3 | 3 | 0.00000298254 |
| Fragaria x ananassa | Fvb1-4 | 6 | CH_fan_780 | 3 | 4 | 0.0000633634 |
| Glycine max | Gm15 | 6 | CH_gma_498 | 3 | 3 | 0.0000117904 |
| Malus domestica | Chr08 | 6 | CH_mdo_277 | 4 | 4 | 0.000000000979163 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_133 | 4 | 5 | 0.00000000398903 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_264 | 3 | 3 | 0.00000236666 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_249 | 4 | 8 | 0.000000263516 |
| Quercus lobata | 11 | 6 | CH_qlo_485 | 5 | 6 | 0.0000000000379549 |
| Quercus lobata | 6 | 6 | CH_qlo_656 | 4 | 4 | 0.00000000980653 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_520 | 4 | 9 | 0.0000000435426 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_700 | 4 | 4 | 0.000000000473454 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |