Functional clusters
Information
- Type InterPro
- Description ABC transporter type 1, transmembrane domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_113 | 5 | 6 | 0.0000000130621 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_241 | 4 | 5 | 0.00000460056 |
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_1250 | 3 | 3 | 0.000311526 |
| Capsicum annuum | PGAv.1.6.scaffold257 | 5 | CH_can_500 | 4 | 10 | 0.0000357014 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_257 | 3 | 3 | 0.000167412 |
| Corylus avellana | 2 | 5 | CH_cav_556 | 3 | 3 | 0.0000871184 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_116 | 4 | 5 | 0.00000091093 |
| Carya illinoinensis | Chr08 | 5 | CH_cil_246 | 5 | 6 | 0.00000000190397 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_346 | 4 | 4 | 0.000000209211 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2963 | 5 | CH_cqu_261 | 5 | 6 | 0.0000000138406 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1186 | 5 | CH_cqu_420 | 4 | 4 | 0.00000106021 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_262 | 5 | 12 | 0.00000109138 |
| Davidia involucrata | GWHABJS00000008 | 5 | CH_din_260 | 4 | 4 | 0.000000170813 |
| Davidia involucrata | GWHABJS00000018 | 5 | CH_din_507 | 3 | 3 | 0.000121973 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_1294 | 3 | 3 | 0.000406335 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_181 | 10 | 16 | 6.52249e-19 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_814 | 4 | 4 | 0.00000090376 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_550 | 3 | 3 | 0.000128962 |
| Glycine max | Gm13 | 5 | CH_gma_245 | 5 | 6 | 0.00000000601071 |
| Glycine max | Gm08 | 5 | CH_gma_436 | 4 | 5 | 0.00000283797 |
| Glycine max | Gm17 | 5 | CH_gma_780 | 3 | 3 | 0.000318617 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_397 | 5 | 7 | 0.0000000291632 |
| Lupinus albus | Lalb_Chr02 | 5 | CH_lal_223 | 4 | 4 | 0.000000332428 |
| Lupinus albus | Lalb_Chr08 | 5 | CH_lal_558 | 3 | 3 | 0.00019793 |
| Lotus japonicus | chr4 | 5 | CH_lja_443 | 3 | 3 | 0.000179685 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_490 | 4 | 4 | 0.000000464444 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_510 | 5 | 12 | 0.000000675573 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_978 | 3 | 3 | 0.000246185 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_979 | 3 | 3 | 0.000246185 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_214 | 5 | 5 | 0.000000000159404 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_801 | 4 | 12 | 0.0000619684 |
| Malus domestica | Chr10 | 5 | CH_mdo_654 | 4 | 6 | 0.00000349252 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1219 | 3 | 4 | 0.000307622 |
| Medicago truncatula | chr8 | 5 | CH_mtr_307 | 6 | 8 | 0.0000000000490274 |
| Medicago truncatula | chr4 | 5 | CH_mtr_897 | 4 | 8 | 0.0000387045 |
| Prunus persica | Pp01 | 5 | CH_ppe_277 | 5 | 7 | 0.00000000832976 |
| Populus trichocarpa | Chr14 | 5 | CH_ptr_210 | 5 | 5 | 0.00000000125757 |
| Phaseolus vulgaris | Chr03 | 5 | CH_pvu_288 | 4 | 4 | 0.000000621007 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1008 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 4 | 5 | CH_qlo_1009 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 5 | 5 | CH_qlo_1010 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 12 | 5 | CH_qlo_389 | 7 | 11 | 0.0000000000010696 |
| Quercus lobata | 9 | 5 | CH_qlo_448 | 7 | 14 | 0.0000000000110711 |
| Quercus lobata | 5 | 5 | CH_qlo_896 | 4 | 4 | 0.000000529726 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_516 | 5 | 8 | 0.0000000390382 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_385 | 5 | 8 | 0.0000000598725 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_466 | 4 | 4 | 0.000000545854 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_841 | 3 | 3 | 0.000272848 |
| Simmondsia chinensis | GWHAASQ00000010 | 5 | CH_sci_339 | 3 | 4 | 0.000158801 |
| Sechium edule | LG11 | 5 | CH_sed_373 | 3 | 3 | 0.000178852 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1316 | 4 | 4 | 0.00000159487 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_563 | 6 | 6 | 0.00000000000936921 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_329 | 4 | 4 | 0.0000000548099 |
| Theobroma cacao | Chromosome_1 | 5 | CH_tca_565 | 3 | 3 | 0.000114175 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_235 | 6 | 21 | 0.000000293914 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_40 | 8 | 11 | 0.00000000000000480254 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_156 | 5 | CH_tpr_663 | 3 | 3 | 0.000411766 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_97 | 5 | 5 | 0.000000000714114 |
| Vitis vinifera | chr19 | 5 | CH_vvi_141 | 6 | 7 | 0.0000000000103441 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_113 | 5 | 6 | 0.0000000130621 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_241 | 4 | 5 | 0.00000460056 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_1250 | 3 | 3 | 0.000311526 |
| Capsicum annuum | PGAv.1.6.scaffold257 | 6 | CH_can_500 | 4 | 10 | 0.0000357014 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_257 | 3 | 3 | 0.000167412 |
| Corylus avellana | 2 | 6 | CH_cav_556 | 3 | 3 | 0.0000871184 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_116 | 4 | 5 | 0.00000091093 |
| Carya illinoinensis | Chr08 | 6 | CH_cil_246 | 5 | 6 | 0.00000000190397 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_346 | 4 | 4 | 0.000000209211 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2963 | 6 | CH_cqu_261 | 5 | 6 | 0.0000000138406 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1186 | 6 | CH_cqu_420 | 4 | 4 | 0.00000106021 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_262 | 5 | 12 | 0.00000109138 |
| Davidia involucrata | GWHABJS00000008 | 6 | CH_din_260 | 4 | 4 | 0.000000170813 |
| Davidia involucrata | GWHABJS00000018 | 6 | CH_din_507 | 3 | 3 | 0.000121973 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_1294 | 3 | 3 | 0.000406335 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_181 | 10 | 16 | 6.52249e-19 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_814 | 4 | 4 | 0.00000090376 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_550 | 3 | 3 | 0.000128962 |
| Fragaria x ananassa | Fvb3-3 | 6 | CH_fan_1006 | 3 | 3 | 0.000384497 |
| Fragaria x ananassa | Fvb4-2 | 6 | CH_fan_918 | 5 | 33 | 0.000199169 |
| Glycine max | Gm13 | 6 | CH_gma_245 | 5 | 6 | 0.00000000601071 |
| Glycine max | Gm08 | 6 | CH_gma_436 | 4 | 5 | 0.00000283797 |
| Glycine max | Gm17 | 6 | CH_gma_780 | 3 | 3 | 0.000318617 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_397 | 5 | 7 | 0.0000000291632 |
| Lupinus albus | Lalb_Chr02 | 6 | CH_lal_223 | 4 | 4 | 0.000000332428 |
| Lupinus albus | Lalb_Chr08 | 6 | CH_lal_558 | 3 | 3 | 0.00019793 |
| Lotus japonicus | chr4 | 6 | CH_lja_443 | 3 | 3 | 0.000179685 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_490 | 4 | 4 | 0.000000464444 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_510 | 5 | 12 | 0.000000675573 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_978 | 3 | 3 | 0.000246185 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_979 | 3 | 3 | 0.000246185 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_214 | 5 | 5 | 0.000000000159404 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_801 | 4 | 12 | 0.0000619684 |
| Malus domestica | Chr10 | 6 | CH_mdo_654 | 4 | 6 | 0.00000349252 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1219 | 3 | 4 | 0.000307622 |
| Medicago truncatula | chr8 | 6 | CH_mtr_307 | 6 | 8 | 0.0000000000490274 |
| Medicago truncatula | chr4 | 6 | CH_mtr_897 | 4 | 8 | 0.0000387045 |
| Prunus persica | Pp01 | 6 | CH_ppe_277 | 5 | 7 | 0.00000000832976 |
| Populus trichocarpa | Chr14 | 6 | CH_ptr_210 | 5 | 5 | 0.00000000125757 |
| Phaseolus vulgaris | Chr03 | 6 | CH_pvu_288 | 4 | 4 | 0.000000621007 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1008 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 4 | 6 | CH_qlo_1009 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 5 | 6 | CH_qlo_1010 | 4 | 5 | 0.00000264462 |
| Quercus lobata | 12 | 6 | CH_qlo_389 | 7 | 11 | 0.0000000000010696 |
| Quercus lobata | 9 | 6 | CH_qlo_448 | 7 | 14 | 0.0000000000110711 |
| Quercus lobata | 5 | 6 | CH_qlo_896 | 4 | 4 | 0.000000529726 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_516 | 5 | 8 | 0.0000000390382 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_385 | 5 | 8 | 0.0000000598725 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_466 | 4 | 4 | 0.000000545854 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_841 | 3 | 3 | 0.000272848 |
| Simmondsia chinensis | GWHAASQ00000010 | 6 | CH_sci_339 | 3 | 4 | 0.000158801 |
| Sechium edule | LG11 | 6 | CH_sed_373 | 3 | 3 | 0.000178852 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1316 | 4 | 4 | 0.00000159487 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_563 | 6 | 6 | 0.00000000000936921 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_329 | 4 | 4 | 0.0000000548099 |
| Theobroma cacao | Chromosome_1 | 6 | CH_tca_565 | 3 | 3 | 0.000114175 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_235 | 6 | 21 | 0.000000293914 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_40 | 8 | 11 | 0.00000000000000480254 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_156 | 6 | CH_tpr_663 | 3 | 3 | 0.000411766 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_97 | 5 | 5 | 0.000000000714114 |
| Vitis vinifera | chr19 | 6 | CH_vvi_141 | 6 | 7 | 0.0000000000103441 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |