Functional clusters
Information
- Type InterPro
- Description Expansin/Lol pI
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_481 | 3 | 3 | 0.000019383 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_84 | 4 | 4 | 0.000000019015 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 5 | CH_arhy_390 | 5 | 7 | 0.00000000284656 |
| Capsicum annuum | PGAv.1.6.scaffold572 | 5 | CH_can_495 | 3 | 3 | 0.0000335369 |
| Ceratophyllum demersum | 7 | 5 | CH_cde_134 | 4 | 7 | 0.00000211094 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1817 | 5 | CH_cqu_504 | 4 | 6 | 0.00000491217 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 5 | CH_cqu_793 | 3 | 3 | 0.000200848 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_66 | 6 | 6 | 0.0000000000000826781 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_530 | 4 | 6 | 0.000000418594 |
| Trochodendron aralioides | group8 | 5 | CH_tar_607 | 3 | 4 | 0.000167908 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_567 | 3 | 4 | 0.000224816 |
| Zea mays | 5 | 5 | CH_zma_119 | 7 | 24 | 0.0000000052044 |
| Acer truncatum | chr5 | 6 | CH_acertr_481 | 3 | 3 | 0.000019383 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_84 | 4 | 4 | 0.000000019015 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 6 | CH_arhy_390 | 5 | 7 | 0.00000000284656 |
| Capsicum annuum | PGAv.1.6.scaffold572 | 6 | CH_can_495 | 3 | 3 | 0.0000335369 |
| Ceratophyllum demersum | 7 | 6 | CH_cde_134 | 4 | 7 | 0.00000211094 |
| Cucumis melo | chr01 | 6 | CH_cme_27 | 9 | 12 | 1.51926e-20 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1817 | 6 | CH_cqu_504 | 4 | 6 | 0.00000491217 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 6 | CH_cqu_793 | 3 | 3 | 0.000200848 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_66 | 6 | 6 | 0.0000000000000826781 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_530 | 4 | 6 | 0.000000418594 |
| Trochodendron aralioides | group8 | 6 | CH_tar_607 | 3 | 4 | 0.000167908 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_567 | 3 | 4 | 0.000224816 |
| Zea mays | 5 | 6 | CH_zma_119 | 7 | 24 | 0.0000000052044 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |