Functional clusters
Information
- Type InterPro
- Description Major pollen allergen Lol pI
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_16 | 6 | 8 | 1.46878e-17 |
| Acer truncatum | chr1 | 5 | CH_acertr_975 | 2 | 2 | 0.00070497 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_628 | 2 | 3 | 0.000802177 |
| Brassica carinata | ChrC02 | 5 | CH_bca_181 | 5 | 10 | 0.00000000000802492 |
| Brassica napus | C07 | 5 | CH_bna_656 | 4 | 20 | 0.00000220092 |
| Brassica napus | A05 | 5 | CH_bna_780 | 3 | 4 | 0.00000755222 |
| Coffea canephora | chr2 | 5 | CH_ccan_189 | 3 | 14 | 0.000000198056 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_259 | 3 | 3 | 0.000000280668 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_96 | 8 | 9 | 3.00272e-25 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_59 | 7 | 8 | 3.22348e-19 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_825 | 2 | 2 | 0.000883652 |
| Gossypium hirsutum | D08 | 5 | CH_ghi_583 | 3 | 3 | 0.0000012192 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_664 | 3 | 4 | 0.00000487591 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_287 | 3 | 3 | 0.000000517353 |
| Lupinus albus | Lalb_Chr03 | 5 | CH_lal_224 | 3 | 3 | 0.000000347064 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_1209 | 2 | 2 | 0.000898311 |
| Malus domestica | Chr07 | 5 | CH_mdo_1383 | 2 | 2 | 0.000796344 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_173 | 6 | 41 | 0.000000000763774 |
| Oryza sativa ssp. japonica | chr10 | 5 | CH_osa_202 | 4 | 5 | 0.00000000675945 |
| Quercus lobata | 12 | 5 | CH_qlo_1007 | 3 | 4 | 0.00000263848 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_787 | 2 | 2 | 0.000955457 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_462 | 7 | 46 | 0.000000000000635823 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_481 | 5 | 6 | 0.0000000000011069 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_102 | 4 | 4 | 0.0000000000842619 |
| Zea mays | 5 | 5 | CH_zma_14 | 9 | 9 | 3.52428e-22 |
| Zea mays | 6 | 5 | CH_zma_206 | 4 | 5 | 0.000000633521 |
| Zea mays | 10 | 5 | CH_zma_364 | 3 | 3 | 0.0000972741 |
| Zea mays | 9 | 5 | CH_zma_37 | 10 | 45 | 0.00000000000000211804 |
| Zea mays | 1 | 5 | CH_zma_460 | 3 | 4 | 0.000388706 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_16 | 6 | 8 | 1.46878e-17 |
| Acer truncatum | chr1 | 6 | CH_acertr_975 | 2 | 2 | 0.00070497 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_628 | 2 | 3 | 0.000802177 |
| Brassica carinata | ChrC02 | 6 | CH_bca_181 | 5 | 10 | 0.00000000000802492 |
| Brassica napus | C07 | 6 | CH_bna_656 | 4 | 20 | 0.00000220092 |
| Brassica napus | A05 | 6 | CH_bna_780 | 3 | 4 | 0.00000755222 |
| Coffea canephora | chr2 | 6 | CH_ccan_189 | 3 | 14 | 0.000000198056 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_259 | 3 | 3 | 0.000000280668 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_96 | 8 | 9 | 3.00272e-25 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_59 | 7 | 8 | 3.22348e-19 |
| Fragaria x ananassa | Fvb7-3 | 6 | CH_fan_915 | 3 | 16 | 0.000195301 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_825 | 2 | 2 | 0.000883652 |
| Gossypium hirsutum | D08 | 6 | CH_ghi_583 | 3 | 3 | 0.0000012192 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_664 | 3 | 4 | 0.00000487591 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_287 | 3 | 3 | 0.000000517353 |
| Lupinus albus | Lalb_Chr03 | 6 | CH_lal_224 | 3 | 3 | 0.000000347064 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_1209 | 2 | 2 | 0.000898311 |
| Malus domestica | Chr07 | 6 | CH_mdo_1383 | 2 | 2 | 0.000796344 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_173 | 6 | 41 | 0.000000000763774 |
| Oryza sativa ssp. japonica | chr10 | 6 | CH_osa_202 | 4 | 5 | 0.00000000675945 |
| Quercus lobata | 12 | 6 | CH_qlo_1007 | 3 | 4 | 0.00000263848 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_787 | 2 | 2 | 0.000955457 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_462 | 7 | 46 | 0.000000000000635823 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_481 | 5 | 6 | 0.0000000000011069 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_102 | 4 | 4 | 0.0000000000842619 |
| Zea mays | 5 | 6 | CH_zma_14 | 9 | 9 | 3.52428e-22 |
| Zea mays | 6 | 6 | CH_zma_206 | 4 | 5 | 0.000000633521 |
| Zea mays | 10 | 6 | CH_zma_364 | 3 | 3 | 0.0000972741 |
| Zea mays | 9 | 6 | CH_zma_37 | 10 | 45 | 0.00000000000000211804 |
| Zea mays | 1 | 6 | CH_zma_460 | 3 | 4 | 0.000388706 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |