Functional clusters
Information
- Type InterPro
- Description Small GTPase superfamily, ARF/SAR type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_1050 | 3 | 5 | 0.000217785 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_930 | 3 | 4 | 0.0000871583 |
| Coffea canephora | chr2 | 5 | CH_ccan_232 | 3 | 12 | 0.00000147618 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_378 | 3 | 6 | 0.000237913 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_734 | 3 | 9 | 0.000448351 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_280 | 4 | 6 | 0.000000103877 |
| Eutrema salsugineum | scaffold_11 | 5 | CH_esa_549 | 3 | 6 | 0.000994377 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_708 | 3 | 3 | 0.0000134039 |
| Lupinus albus | Lalb_Chr16 | 5 | CH_lal_440 | 3 | 3 | 0.0000627194 |
| Lupinus albus | Lalb_Chr09 | 5 | CH_lal_441 | 3 | 3 | 0.0000627194 |
| Medicago truncatula | chr5 | 5 | CH_mtr_770 | 3 | 3 | 0.00000389956 |
| Physcomitrium patens | Chr12 | 5 | CH_ppa_196 | 3 | 4 | 0.0001347 |
| Physcomitrium patens | Chr04 | 5 | CH_ppa_197 | 3 | 4 | 0.0001347 |
| Quercus lobata | 3 | 5 | CH_qlo_1118 | 4 | 12 | 0.0000149987 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_762 | 5 | 27 | 0.00000230927 |
| Salix brachista | GWHAAZH00000005 | 5 | CH_sbr_178 | 7 | 42 | 0.0000000024005 |
| Salix brachista | GWHAAZH00000005 | 5 | CH_sbr_445 | 3 | 3 | 0.0000588485 |
| Sapria himalayana | scaffold70_2545932 | 5 | CH_shi_180 | 11 | 45 | 0.000000492474 |
| Sapria himalayana | scaffold51_3900769 | 5 | CH_shi_229 | 9 | 36 | 0.0000292882 |
| Sapria himalayana | scaffold85_1789505 | 5 | CH_shi_363 | 8 | 28 | 0.0000804056 |
| Sapria himalayana | scaffold29_7503565 | 5 | CH_shi_588 | 8 | 37 | 0.000898924 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_347 | 3 | 3 | 0.00000584491 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_111 | 5 | 7 | 0.00000000018189 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_734 | 3 | 10 | 0.000799374 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_1050 | 3 | 5 | 0.000217785 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_930 | 3 | 4 | 0.0000871583 |
| Coffea canephora | chr2 | 6 | CH_ccan_232 | 3 | 12 | 0.00000147618 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_378 | 3 | 6 | 0.000237913 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_734 | 3 | 9 | 0.000448351 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_280 | 4 | 6 | 0.000000103877 |
| Eutrema salsugineum | scaffold_11 | 6 | CH_esa_549 | 3 | 6 | 0.000994377 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_708 | 3 | 3 | 0.0000134039 |
| Lupinus albus | Lalb_Chr16 | 6 | CH_lal_440 | 3 | 3 | 0.0000627194 |
| Lupinus albus | Lalb_Chr09 | 6 | CH_lal_441 | 3 | 3 | 0.0000627194 |
| Medicago truncatula | chr5 | 6 | CH_mtr_770 | 3 | 3 | 0.00000389956 |
| Physcomitrium patens | Chr12 | 6 | CH_ppa_196 | 3 | 4 | 0.0001347 |
| Physcomitrium patens | Chr04 | 6 | CH_ppa_197 | 3 | 4 | 0.0001347 |
| Quercus lobata | 3 | 6 | CH_qlo_1118 | 4 | 12 | 0.0000149987 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_762 | 5 | 27 | 0.00000230927 |
| Salix brachista | GWHAAZH00000005 | 6 | CH_sbr_178 | 7 | 42 | 0.0000000024005 |
| Salix brachista | GWHAAZH00000005 | 6 | CH_sbr_445 | 3 | 3 | 0.0000588485 |
| Sapria himalayana | scaffold70_2545932 | 6 | CH_shi_180 | 11 | 45 | 0.000000492474 |
| Sapria himalayana | scaffold51_3900769 | 6 | CH_shi_229 | 9 | 36 | 0.0000292882 |
| Sapria himalayana | scaffold85_1789505 | 6 | CH_shi_363 | 8 | 28 | 0.0000804056 |
| Sapria himalayana | scaffold29_7503565 | 6 | CH_shi_588 | 8 | 37 | 0.000898924 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_347 | 3 | 3 | 0.00000584491 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_111 | 5 | 7 | 0.00000000018189 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_734 | 3 | 10 | 0.000799374 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |