Functional clusters
Information
- Type InterPro
- Description Membrane transport protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 5 | CH_atr_55 | 6 | 8 | 0.0000000000000369838 |
| Brassica carinata | ChrB08 | 5 | CH_bca_1158 | 3 | 3 | 0.0000246688 |
| Brassica carinata | ChrB08 | 5 | CH_bca_1839 | 3 | 6 | 0.000492672 |
| Chara braunii | BFEA01000325 | 5 | CH_cbr_267 | 2 | 2 | 0.000215781 |
| Citrullus lanatus | CG_Chr11 | 5 | CH_cla_162 | 4 | 16 | 0.0000115902 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_219 | 4 | 6 | 0.000000204643 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_1041 | 3 | 4 | 0.0000534102 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_856 | 3 | 4 | 0.0000755451 |
| Marchantia polymorpha | scaffold_27 | 5 | CH_mpo_106 | 3 | 5 | 0.0000102411 |
| Olea europaea | scaffold119 | 5 | CH_oeu_504 | 3 | 6 | 0.000249653 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_191 | 5 | 7 | 0.0000000000662788 |
| Sechium edule | LG11 | 5 | CH_sed_351 | 3 | 5 | 0.000101438 |
| Amborella trichopoda | AmTr_v1.0_scaffold00038 | 6 | CH_atr_55 | 6 | 8 | 0.0000000000000369838 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1158 | 3 | 3 | 0.0000246688 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1839 | 3 | 6 | 0.000492672 |
| Chara braunii | BFEA01000325 | 6 | CH_cbr_267 | 2 | 2 | 0.000215781 |
| Citrullus lanatus | CG_Chr11 | 6 | CH_cla_162 | 4 | 16 | 0.0000115902 |
| Cucumis melo | chr05 | 6 | CH_cme_119 | 4 | 4 | 0.00000000272572 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_219 | 4 | 6 | 0.000000204643 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_1041 | 3 | 4 | 0.0000534102 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_856 | 3 | 4 | 0.0000755451 |
| Marchantia polymorpha | scaffold_27 | 6 | CH_mpo_106 | 3 | 5 | 0.0000102411 |
| Olea europaea | scaffold119 | 6 | CH_oeu_504 | 3 | 6 | 0.000249653 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_191 | 5 | 7 | 0.0000000000662788 |
| Sechium edule | LG11 | 6 | CH_sed_351 | 3 | 5 | 0.000101438 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |