Functional clusters
Information
- Type InterPro
- Description Auxin efflux carrier component 2
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group6 | 5 | CH_ach_256 | 2 | 2 | 0.0000543213 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_462 | 2 | 2 | 0.00049675 |
| Glycine max | Gm09 | 5 | CH_gma_853 | 2 | 2 | 0.000569336 |
| Lupinus albus | Lalb_Chr25 | 5 | CH_lal_744 | 2 | 2 | 0.000787236 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_745 | 2 | 2 | 0.000787236 |
| Medicago truncatula | chr4 | 5 | CH_mtr_1050 | 2 | 2 | 0.000123259 |
| Nelumbo nucifera | chr8 | 5 | CH_nnu_533 | 2 | 3 | 0.000433498 |
| Punica granatum | NC_045127.1 | 5 | CH_pgr_38 | 6 | 7 | 2.62331e-18 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_207 | 3 | 4 | 0.0000000653034 |
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_1248 | 2 | 4 | 0.000811015 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_1249 | 2 | 4 | 0.000811015 |
| Phaseolus vulgaris | Chr09 | 5 | CH_pvu_253 | 3 | 3 | 0.000000161953 |
| Quercus lobata | CM012294 | 5 | CH_qlo_690 | 3 | 3 | 0.0000000159937 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_2376 | 2 | 3 | 0.000438418 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_189 | 3 | 3 | 0.0000000343818 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_500 | 2 | 2 | 0.000387685 |
| Actinidia chinensis | Lachesis_group6 | 6 | CH_ach_256 | 2 | 2 | 0.0000543213 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_462 | 2 | 2 | 0.00049675 |
| Glycine max | Gm09 | 6 | CH_gma_853 | 2 | 2 | 0.000569336 |
| Lupinus albus | Lalb_Chr25 | 6 | CH_lal_744 | 2 | 2 | 0.000787236 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_745 | 2 | 2 | 0.000787236 |
| Medicago truncatula | chr4 | 6 | CH_mtr_1050 | 2 | 2 | 0.000123259 |
| Nelumbo nucifera | chr8 | 6 | CH_nnu_533 | 2 | 3 | 0.000433498 |
| Punica granatum | NC_045127.1 | 6 | CH_pgr_38 | 6 | 7 | 2.62331e-18 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_207 | 3 | 4 | 0.0000000653034 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_1248 | 2 | 4 | 0.000811015 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_1249 | 2 | 4 | 0.000811015 |
| Phaseolus vulgaris | Chr09 | 6 | CH_pvu_253 | 3 | 3 | 0.000000161953 |
| Quercus lobata | CM012294 | 6 | CH_qlo_690 | 3 | 3 | 0.0000000159937 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_2376 | 2 | 3 | 0.000438418 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_189 | 3 | 3 | 0.0000000343818 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_500 | 2 | 2 | 0.000387685 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |