Functional clusters
Information
- Type InterPro
- Description Actin family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_4 | 5 | CH_aly_361 | 3 | 3 | 0.00000745 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_195 | 3 | 4 | 0.000041174 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 5 | CH_arhy_1000 | 3 | 5 | 0.000165768 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_527 | 3 | 12 | 0.000308233 |
| Capsicum annuum | PGAv.1.6.scaffold941 | 5 | CH_can_596 | 3 | 4 | 0.0000828227 |
| Corylus avellana | 2 | 5 | CH_cav_467 | 3 | 5 | 0.0000599072 |
| Chara braunii | BFEA01000274 | 5 | CH_cbr_288 | 3 | 10 | 0.00033819 |
| Durio zibethinus | NW_019167937.1 | 5 | CH_dzi_346 | 3 | 3 | 0.0000250381 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_470 | 3 | 4 | 0.0000489648 |
| Gossypium hirsutum | A11 | 5 | CH_ghi_1224 | 3 | 5 | 0.000584629 |
| Gossypium hirsutum | D11 | 5 | CH_ghi_812 | 3 | 3 | 0.000058543 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_228 | 6 | 33 | 0.00000000119011 |
| Magnolia biondii | Chr09 | 5 | CH_mbi_1170 | 3 | 12 | 0.000527968 |
| Malus domestica | Chr11 | 5 | CH_mdo_275 | 6 | 26 | 0.000000000783387 |
| Nicotiana tabacum | Nitab4.5_0000032 | 5 | CH_nta_10 | 7 | 7 | 9.04879e-17 |
| Nicotiana tabacum | Nitab4.5_0000163 | 5 | CH_nta_73 | 4 | 4 | 0.0000000592623 |
| Olea europaea | chr17 | 5 | CH_oeu_235 | 3 | 3 | 0.00000658207 |
| Petunia axillaris | Peaxi162Scf00765 | 5 | CH_pax_191 | 5 | 19 | 0.000000112567 |
| Phaseolus vulgaris | Chr01 | 5 | CH_pvu_383 | 3 | 3 | 0.0000186246 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_521 | 5 | 53 | 0.00000314021 |
| Striga asiatica | scaffold25 | 5 | CH_sas_88 | 3 | 3 | 0.00000478708 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_102 | 8 | 30 | 7.98709e-16 |
| Salix brachista | GWHAAZH00000011 | 5 | CH_sbr_624 | 3 | 8 | 0.000512441 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1152 | 4 | 6 | 0.000000272076 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1513 | 3 | 3 | 0.0000232991 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1514 | 3 | 3 | 0.0000232991 |
| Sapria himalayana | scaffold95_1435917 | 5 | CH_shi_224 | 3 | 5 | 0.0000178431 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_665 | 3 | 5 | 0.000150985 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_132 | 7 | 18 | 0.0000000000000704622 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_342 | 3 | 4 | 0.0000435446 |
| Arabidopsis lyrata | scaffold_4 | 6 | CH_aly_361 | 3 | 3 | 0.00000745 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_195 | 3 | 4 | 0.000041174 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 6 | CH_arhy_1000 | 3 | 5 | 0.000165768 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_527 | 3 | 12 | 0.000308233 |
| Capsicum annuum | PGAv.1.6.scaffold941 | 6 | CH_can_596 | 3 | 4 | 0.0000828227 |
| Corylus avellana | 2 | 6 | CH_cav_467 | 3 | 5 | 0.0000599072 |
| Chara braunii | BFEA01000274 | 6 | CH_cbr_288 | 3 | 10 | 0.00033819 |
| Durio zibethinus | NW_019167937.1 | 6 | CH_dzi_346 | 3 | 3 | 0.0000250381 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_470 | 3 | 4 | 0.0000489648 |
| Gossypium hirsutum | A11 | 6 | CH_ghi_1224 | 3 | 5 | 0.000584629 |
| Gossypium hirsutum | D11 | 6 | CH_ghi_812 | 3 | 3 | 0.000058543 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_228 | 6 | 33 | 0.00000000119011 |
| Magnolia biondii | Chr09 | 6 | CH_mbi_1170 | 3 | 12 | 0.000527968 |
| Malus domestica | Chr11 | 6 | CH_mdo_275 | 6 | 26 | 0.000000000783387 |
| Nicotiana tabacum | Nitab4.5_0000032 | 6 | CH_nta_10 | 7 | 7 | 9.04879e-17 |
| Nicotiana tabacum | Nitab4.5_0000163 | 6 | CH_nta_73 | 4 | 4 | 0.0000000592623 |
| Olea europaea | chr17 | 6 | CH_oeu_235 | 3 | 3 | 0.00000658207 |
| Petunia axillaris | Peaxi162Scf00765 | 6 | CH_pax_191 | 5 | 19 | 0.000000112567 |
| Phaseolus vulgaris | Chr01 | 6 | CH_pvu_383 | 3 | 3 | 0.0000186246 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_521 | 5 | 53 | 0.00000314021 |
| Striga asiatica | scaffold25 | 6 | CH_sas_88 | 3 | 3 | 0.00000478708 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_102 | 8 | 30 | 7.98709e-16 |
| Salix brachista | GWHAAZH00000011 | 6 | CH_sbr_624 | 3 | 8 | 0.000512441 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1152 | 4 | 6 | 0.000000272076 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1513 | 3 | 3 | 0.0000232991 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1514 | 3 | 3 | 0.0000232991 |
| Sapria himalayana | scaffold95_1435917 | 6 | CH_shi_224 | 3 | 5 | 0.0000178431 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_665 | 3 | 5 | 0.000150985 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_132 | 7 | 18 | 0.0000000000000704622 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_342 | 3 | 4 | 0.0000435446 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |