Functional clusters

Information

  • Type InterPro
  • Description Zinc finger, CCHC-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 5 CH_arhy_389 6 8 0.00000000282517
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 5 CH_arhy_513 9 69 0.000000176525
Brassica napus A08 5 CH_bna_1187 3 3 0.000231313
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_156 28 69 0.00000000104042
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_287 26 72 0.000000214124
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_345 24 66 0.00000118321
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_362 23 62 0.0000019016
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_376 26 79 0.00000239634
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_476 25 80 0.000019525
Helianthus annuus HanXRQChr09 5 CH_han_1145 4 6 0.000609134
Petunia axillaris Peaxi162Scf00635 5 CH_pax_40 7 11 0.0000000000000483055
Physcomitrium patens Chr04 5 CH_ppa_200 3 3 0.000147747
Solanum pennellii Spenn-ch01 5 CH_spe_97 28 76 0.000000000003375
Vanilla planifolia CM028152.1 5 CH_vpl_498 3 4 0.000214202
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 6 CH_arhy_389 6 8 0.00000000282517
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 6 CH_arhy_513 9 69 0.000000176525
Brassica napus A08 6 CH_bna_1187 3 3 0.000231313
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_156 28 69 0.00000000104042
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_287 26 72 0.000000214124
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_345 24 66 0.00000118321
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_362 23 62 0.0000019016
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_376 26 79 0.00000239634
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_476 25 80 0.000019525
Helianthus annuus HanXRQChr09 6 CH_han_1145 4 6 0.000609134
Petunia axillaris Peaxi162Scf00635 6 CH_pax_40 7 11 0.0000000000000483055
Physcomitrium patens Chr04 6 CH_ppa_200 3 3 0.000147747
Solanum pennellii Spenn-ch01 6 CH_spe_97 28 76 0.000000000003375
Vanilla planifolia CM028152.1 6 CH_vpl_498 3 4 0.000214202

Available child term results

Ontology identifier Description Number of clusters
IPR025829 Zinc knuckle CX2CX3GHX4C 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001