Functional clusters

Information

  • Type InterPro
  • Description Zinc knuckle CX2CX3GHX4C

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum A04 5 CH_ghi_1192 2 2 0.000560733
Hydrangea macrophylla Hma1.2p1_0316F.1 5 CH_hma_275 2 2 0.000111086
Manihot esculenta Chromosome16 5 CH_mes_618 2 2 0.000366379
Punica granatum NC_045134.1 5 CH_pgr_584 2 3 0.000675279
Vanilla planifolia CM028150.1 5 CH_vpl_502 2 3 0.000221656
Gossypium hirsutum A04 6 CH_ghi_1192 2 2 0.000560733
Hydrangea macrophylla Hma1.2p1_0316F.1 6 CH_hma_275 2 2 0.000111086
Manihot esculenta Chromosome16 6 CH_mes_618 2 2 0.000366379
Punica granatum NC_045134.1 6 CH_pgr_584 2 3 0.000675279
Vanilla planifolia CM028150.1 6 CH_vpl_502 2 3 0.000221656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001