Functional clusters

Information

  • Type InterPro
  • Description Small GTPase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_820 3 3 0.000296046
Camellia sinensis var. sinensis Chr3 5 CH_camsi_1389 4 11 0.000673635
Corylus avellana 10 5 CH_cav_753 3 3 0.000482678
Ceratophyllum demersum 3 5 CH_cde_545 3 3 0.000957599
Carpinus fangiana scaffold9 5 CH_cfa_568 3 3 0.000470979
Citrullus lanatus CG_Chr05 5 CH_cla_313 3 3 0.000446469
Helianthus annuus HanXRQChr15 5 CH_han_604 4 4 0.00000297406
Medicago truncatula chr8 5 CH_mtr_560 5 9 0.000000131647
Tripterygium wilfordii NC_052234.1 5 CH_twi_511 3 3 0.000585496
Acer truncatum chr8 6 CH_acertr_820 3 3 0.000296046
Camellia sinensis var. sinensis Chr3 6 CH_camsi_1389 4 11 0.000673635
Corylus avellana 10 6 CH_cav_753 3 3 0.000482678
Ceratophyllum demersum 3 6 CH_cde_545 3 3 0.000957599
Carpinus fangiana scaffold9 6 CH_cfa_568 3 3 0.000470979
Citrullus lanatus CG_Chr05 6 CH_cla_313 3 3 0.000446469
Helianthus annuus HanXRQChr15 6 CH_han_604 4 4 0.00000297406
Medicago truncatula chr8 6 CH_mtr_560 5 9 0.000000131647
Tripterygium wilfordii NC_052234.1 6 CH_twi_511 3 3 0.000585496

Available child term results

Ontology identifier Description Number of clusters
IPR002041 Ran GTPase 85
IPR003578 Small GTPase Rho 12
IPR017231 Small GTPase Tem1/Spg1 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001