Functional clusters
Information
- Type InterPro
- Description Small GTPase Rho
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC05 | 5 | CH_bca_1092 | 3 | 3 | 0.0000142742 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1263 | 3 | 4 | 0.0000570741 |
| Coffea canephora | chr6 | 5 | CH_ccan_689 | 2 | 4 | 0.000702709 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_487 | 3 | 3 | 0.000000583784 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_391 | 4 | 19 | 0.00000422637 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1270 | 3 | 3 | 0.00000101811 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1092 | 3 | 3 | 0.0000142742 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1263 | 3 | 4 | 0.0000570741 |
| Coffea canephora | chr6 | 6 | CH_ccan_689 | 2 | 4 | 0.000702709 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_487 | 3 | 3 | 0.000000583784 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_391 | 4 | 19 | 0.00000422637 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1270 | 3 | 3 | 0.00000101811 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |