Functional clusters

Information

  • Type Gene Ontology
  • Description plant organ development

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044373.1 3 CH_cansat_362 10 36 0.000851224
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_677 14 78 0.000369239
Cannabis sativa NC_044373.1 4 CH_cansat_362 10 36 0.000851224
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_677 14 78 0.000369239

Available child term results

Ontology identifier Description Number of clusters
GO:0009901 anther dehiscence 8
GO:0010054 trichoblast differentiation 2
GO:0010063 positive regulation of trichoblast fate specification 2
GO:0010071 root meristem specification 6
GO:0010082 regulation of root meristem growth 2
GO:0010086 embryonic root morphogenesis 12
GO:0010094 specification of carpel identity 6
GO:0010097 specification of stamen identity 6
GO:0010102 lateral root morphogenesis 8
GO:0010150 leaf senescence 18
GO:0010227 floral organ abscission 4
GO:0010234 anther wall tapetum cell fate specification 12
GO:0010311 lateral root formation 6
GO:0010338 leaf formation 2
GO:0010434 bract formation 6
GO:0010479 stele development 4
GO:0010480 microsporocyte differentiation 4
GO:0010588 cotyledon vascular tissue pattern formation 4
GO:0010622 specification of ovule identity 2
GO:0035670 plant-type ovary development 2
GO:0048364 root development 38
GO:0048366 leaf development 12
GO:0048437 floral organ development 2
GO:0048440 carpel development 2
GO:0048444 floral organ morphogenesis 6
GO:0048446 petal morphogenesis 2
GO:0048449 floral organ formation 2
GO:0048451 petal formation 2
GO:0048462 carpel formation 4
GO:0048481 plant ovule development 2
GO:0048482 plant ovule morphogenesis 2
GO:0048527 lateral root development 6
GO:0048528 post-embryonic root development 2
GO:0048653 anther development 6
GO:0048654 anther morphogenesis 18
GO:0048658 anther wall tapetum development 16
GO:0048767 root hair elongation 12
GO:0048768 root hair cell tip growth 4
GO:0048829 root cap development 8
GO:0048830 adventitious root development 8
GO:0060776 simple leaf morphogenesis 6
GO:0060777 compound leaf morphogenesis 8
GO:0060858 vesicle-mediated transport involved in floral organ abscission 2
GO:0060862 negative regulation of floral organ abscission 4
GO:0062211 root regeneration 12
GO:0080022 primary root development 2
GO:0080086 stamen filament development 60
GO:0080147 root hair cell development 4
GO:0080166 stomium development 2
GO:0080181 lateral root branching 6
GO:0080187 floral organ senescence 2
GO:0090057 root radial pattern formation 6
GO:1900055 regulation of leaf senescence 8
GO:1901332 negative regulation of lateral root development 18
GO:1901333 positive regulation of lateral root development 4
GO:1901371 regulation of leaf morphogenesis 2
GO:1902892 positive regulation of root hair elongation 2
GO:1905421 regulation of plant organ morphogenesis 2
GO:2000024 regulation of leaf development 8
GO:2000025 regulation of leaf formation 2
GO:2000280 regulation of root development 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001