Functional clusters
Information
- Type Gene Ontology
- Description stamen filament development
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 3 | CH_bca_142 | 4 | 6 | 0.00000000389108 |
| Brassica carinata | ChrB03 | 3 | CH_bca_330 | 3 | 3 | 0.00000121391 |
| Brassica carinata | ChrB07 | 3 | CH_bca_390 | 3 | 4 | 0.00000485479 |
| Brassica napus | A08 | 3 | CH_bna_106 | 4 | 5 | 0.00000000046472 |
| Brassica napus | C03 | 3 | CH_bna_107 | 4 | 5 | 0.00000000046472 |
| Brassica oleracea | C3 | 3 | CH_bol_58 | 4 | 4 | 0.00000000014301 |
| Brassica rapa | A08 | 3 | CH_bra_45 | 4 | 4 | 0.000000000324045 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 3 | CH_bvu_3 | 10 | 11 | 1.14242e-28 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_29 | 7 | 9 | 1.48247e-18 |
| Ceratophyllum demersum | 3 | 3 | CH_cde_17 | 5 | 7 | 0.000000000205999 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 3 | CH_cqu_2 | 16 | 16 | 5.48011e-46 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 3 | CH_cqu_3 | 15 | 19 | 3.57683e-39 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_81 | 8 | 10 | 1.45919e-21 |
| Fragaria x ananassa | Fvb6-2 | 3 | CH_fan_149 | 4 | 18 | 0.000000177689 |
| Gossypium hirsutum | D02 | 3 | CH_ghi_13 | 12 | 16 | 1.74657e-33 |
| Hydrangea macrophylla | Hma1.2p1_0634F.1 | 3 | CH_hma_30 | 4 | 4 | 0.000000000287922 |
| Magnolia biondii | Chr08 | 3 | CH_mbi_12 | 11 | 29 | 1.27625e-24 |
| Magnolia biondii | Chr05 | 3 | CH_mbi_50 | 8 | 35 | 0.000000000000010372 |
| Nelumbo nucifera | chr6 | 3 | CH_nnu_1 | 27 | 44 | 1.66951e-69 |
| Nicotiana tabacum | Nitab4.5_0001438 | 3 | CH_nta_23 | 4 | 9 | 0.0000000581907 |
| Oryza sativa ssp. japonica | chr09 | 3 | CH_osa_8 | 10 | 20 | 1.82905e-25 |
| Petunia axillaris | Peaxi162Scf00334 | 3 | CH_pax_227 | 3 | 8 | 0.000118743 |
| Prunus persica | Pp07 | 3 | CH_ppe_218 | 3 | 3 | 0.000000701166 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_313 | 3 | 3 | 0.000000393344 |
| Solanum pennellii | Spenn-ch04 | 3 | CH_spe_27 | 6 | 7 | 0.00000000000000631162 |
| Solanum pennellii | Spenn-ch11 | 3 | CH_spe_8 | 9 | 10 | 6.78683e-25 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_5 | 15 | 19 | 4.12239e-39 |
| Tripterygium wilfordii | NC_052253.1 | 3 | CH_twi_62 | 4 | 4 | 0.00000000159405 |
| Zea mays | 7 | 3 | CH_zma_39 | 5 | 7 | 0.0000000000707582 |
| Zea mays | 2 | 3 | CH_zma_6 | 9 | 11 | 1.13793e-23 |
| Brassica carinata | ChrC01 | 4 | CH_bca_142 | 4 | 6 | 0.00000000389108 |
| Brassica carinata | ChrB03 | 4 | CH_bca_330 | 3 | 3 | 0.00000121391 |
| Brassica carinata | ChrB07 | 4 | CH_bca_390 | 3 | 4 | 0.00000485479 |
| Brassica napus | A08 | 4 | CH_bna_106 | 4 | 5 | 0.00000000046472 |
| Brassica napus | C03 | 4 | CH_bna_107 | 4 | 5 | 0.00000000046472 |
| Brassica oleracea | C3 | 4 | CH_bol_58 | 4 | 4 | 0.00000000014301 |
| Brassica rapa | A08 | 4 | CH_bra_45 | 4 | 4 | 0.000000000324045 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 4 | CH_bvu_3 | 10 | 11 | 1.14242e-28 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_29 | 7 | 9 | 1.48247e-18 |
| Ceratophyllum demersum | 3 | 4 | CH_cde_17 | 5 | 7 | 0.000000000205999 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1040 | 4 | CH_cqu_2 | 16 | 16 | 5.48011e-46 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 4 | CH_cqu_3 | 15 | 19 | 3.57683e-39 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_81 | 8 | 10 | 1.45919e-21 |
| Fragaria x ananassa | Fvb6-2 | 4 | CH_fan_149 | 4 | 18 | 0.000000177689 |
| Gossypium hirsutum | D02 | 4 | CH_ghi_13 | 12 | 16 | 1.74657e-33 |
| Hydrangea macrophylla | Hma1.2p1_0634F.1 | 4 | CH_hma_30 | 4 | 4 | 0.000000000287922 |
| Magnolia biondii | Chr08 | 4 | CH_mbi_12 | 11 | 29 | 1.27625e-24 |
| Magnolia biondii | Chr05 | 4 | CH_mbi_50 | 8 | 35 | 0.000000000000010372 |
| Nelumbo nucifera | chr6 | 4 | CH_nnu_1 | 27 | 44 | 1.66951e-69 |
| Nicotiana tabacum | Nitab4.5_0001438 | 4 | CH_nta_23 | 4 | 9 | 0.0000000581907 |
| Oryza sativa ssp. japonica | chr09 | 4 | CH_osa_8 | 10 | 20 | 1.82905e-25 |
| Petunia axillaris | Peaxi162Scf00334 | 4 | CH_pax_227 | 3 | 8 | 0.000118743 |
| Prunus persica | Pp07 | 4 | CH_ppe_218 | 3 | 3 | 0.000000701166 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_313 | 3 | 3 | 0.000000393344 |
| Solanum pennellii | Spenn-ch04 | 4 | CH_spe_27 | 6 | 7 | 0.00000000000000631162 |
| Solanum pennellii | Spenn-ch11 | 4 | CH_spe_8 | 9 | 10 | 6.78683e-25 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_5 | 15 | 19 | 4.12239e-39 |
| Tripterygium wilfordii | NC_052253.1 | 4 | CH_twi_62 | 4 | 4 | 0.00000000159405 |
| Zea mays | 7 | 4 | CH_zma_39 | 5 | 7 | 0.0000000000707582 |
| Zea mays | 2 | 4 | CH_zma_6 | 9 | 11 | 1.13793e-23 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |