Functional clusters

Information

  • Type Gene Ontology
  • Description DNA conformation change

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria x ananassa Fvb5-3 3 CH_fan_161 4 5 0.000000253825
Fragaria x ananassa Fvb5-3 4 CH_fan_161 4 5 0.000000253825

Available child term results

Ontology identifier Description Number of clusters
GO:0000183 rDNA heterochromatin assembly 16
GO:0006265 DNA topological change 2
GO:0006268 DNA unwinding involved in DNA replication 2
GO:0006334 nucleosome assembly 46
GO:0006335 DNA replication-dependent nucleosome assembly 12
GO:0006336 DNA replication-independent nucleosome assembly 16
GO:0006346 DNA methylation-dependent heterochromatin assembly 6
GO:0007076 mitotic chromosome condensation 6
GO:0010964 regulation of heterochromatin assembly by small RNA 4
GO:0016584 nucleosome positioning 2
GO:0030261 chromosome condensation 20
GO:0031508 pericentric heterochromatin assembly 18
GO:0032508 DNA duplex unwinding 12
GO:0034080 CENP-A containing nucleosome assembly 4
GO:0036292 DNA rewinding 4
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 8
GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly 2
GO:1903099 positive regulation of CENP-A containing nucleosome assembly 6
GO:1905775 negative regulation of DNA helicase activity 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001