Functional clusters

Information

  • Type Gene Ontology
  • Description chromosome condensation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00003 3 CH_atr_314 2 3 0.000714919
Ceratophyllum demersum 2 3 CH_cde_133 2 2 0.000236939
Cardamine hirsuta Chr3 3 CH_chi_272 2 2 0.000207361
Lupinus albus Lalb_Chr06 3 CH_lal_125 3 3 0.000000347064
Magnolia biondii Chr13 3 CH_mbi_330 3 4 0.00000792324
Magnolia biondii Chr08 3 CH_mbi_389 3 6 0.0000395955
Sequoiadendron giganteum chr6 3 CH_sgi_1139 2 3 0.000146145
Sapria himalayana scaffold67_2653777 3 CH_shi_196 2 4 0.000171541
Trochodendron aralioides group17 3 CH_tar_483 2 2 0.000900549
Trochodendron aralioides group9 3 CH_tar_484 2 2 0.000900549
Amborella trichopoda AmTr_v1.0_scaffold00003 4 CH_atr_314 2 3 0.000714919
Ceratophyllum demersum 2 4 CH_cde_133 2 2 0.000236939
Cardamine hirsuta Chr3 4 CH_chi_272 2 2 0.000207361
Lupinus albus Lalb_Chr06 4 CH_lal_125 3 3 0.000000347064
Magnolia biondii Chr13 4 CH_mbi_330 3 4 0.00000792324
Magnolia biondii Chr08 4 CH_mbi_389 3 6 0.0000395955
Sequoiadendron giganteum chr6 4 CH_sgi_1139 2 3 0.000146145
Sapria himalayana scaffold67_2653777 4 CH_shi_196 2 4 0.000171541
Trochodendron aralioides group17 4 CH_tar_483 2 2 0.000900549
Trochodendron aralioides group9 4 CH_tar_484 2 2 0.000900549

Available child term results

Ontology identifier Description Number of clusters
GO:0007076 mitotic chromosome condensation 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001