Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of gene silencing

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Daucus carota DCARv2_Chr4 3 CH_dca_278 3 3 0.000178532
Hydrangea macrophylla Hma1.2p1_0416F.1 3 CH_hma_85 4 6 0.000000920473
Daucus carota DCARv2_Chr4 4 CH_dca_278 3 3 0.000178532
Hydrangea macrophylla Hma1.2p1_0416F.1 4 CH_hma_85 4 6 0.000000920473

Available child term results

Ontology identifier Description Number of clusters
GO:0031935 regulation of chromatin silencing 8
GO:0031937 positive regulation of chromatin silencing 14
GO:0060149 negative regulation of posttranscriptional gene silencing 2
GO:0060966 regulation of gene silencing by RNA 2
GO:0070920 regulation of production of small RNA involved in gene silencing by RNA 2
GO:0090065 regulation of production of siRNA involved in RNA interference 16
GO:1900368 regulation of RNA interference 2
GO:1900369 negative regulation of RNA interference 4
GO:1900370 positive regulation of RNA interference 22
GO:2000636 positive regulation of primary miRNA processing 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001