Functional clusters
Information
- Type Gene Ontology
- Description positive regulation of RNA interference
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 3 | CH_bvu_266 | 2 | 2 | 0.000827917 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 3 | CH_eca_483 | 2 | 2 | 0.000942317 |
Fragaria vesca | Fvb5 | 3 | CH_fve_367 | 2 | 2 | 0.000589102 |
Helianthus annuus | HanXRQChr14 | 3 | CH_han_143 | 4 | 5 | 0.000000000109057 |
Medicago truncatula | chr7 | 3 | CH_mtr_193 | 4 | 5 | 0.00000000104127 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_739 | 2 | 2 | 0.000597979 |
Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_145 | 4 | 5 | 0.0000000146903 |
Solanum tuberosum | ST4.03ch12 | 3 | CH_stu_331 | 3 | 6 | 0.0000173222 |
Solanum tuberosum | ST4.03ch08 | 3 | CH_stu_332 | 3 | 6 | 0.0000173222 |
Trifolium pratense | Tp57577_TGAC_v2_LG6 | 3 | CH_tpr_101 | 3 | 3 | 0.000000300841 |
Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_397 | 2 | 2 | 0.000929238 |
Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 4 | CH_bvu_266 | 2 | 2 | 0.000827917 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 4 | CH_eca_483 | 2 | 2 | 0.000942317 |
Fragaria vesca | Fvb5 | 4 | CH_fve_367 | 2 | 2 | 0.000589102 |
Helianthus annuus | HanXRQChr14 | 4 | CH_han_143 | 4 | 5 | 0.000000000109057 |
Medicago truncatula | chr7 | 4 | CH_mtr_193 | 4 | 5 | 0.00000000104127 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_739 | 2 | 2 | 0.000597979 |
Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_145 | 4 | 5 | 0.0000000146903 |
Solanum tuberosum | ST4.03ch12 | 4 | CH_stu_331 | 3 | 6 | 0.0000173222 |
Solanum tuberosum | ST4.03ch08 | 4 | CH_stu_332 | 3 | 6 | 0.0000173222 |
Trifolium pratense | Tp57577_TGAC_v2_LG6 | 4 | CH_tpr_101 | 3 | 3 | 0.000000300841 |
Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_397 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |