Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of RNA interference

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr5_EL10_PGA_scaffold2 3 CH_bvu_266 2 2 0.000827917
Erigeron canadensis Conyza_canadensis_scaffold:4 3 CH_eca_483 2 2 0.000942317
Fragaria vesca Fvb5 3 CH_fve_367 2 2 0.000589102
Helianthus annuus HanXRQChr14 3 CH_han_143 4 5 0.000000000109057
Medicago truncatula chr7 3 CH_mtr_193 4 5 0.00000000104127
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_739 2 2 0.000597979
Solanum lycopersicum SL4.0ch01 3 CH_sly_145 4 5 0.0000000146903
Solanum tuberosum ST4.03ch12 3 CH_stu_331 3 6 0.0000173222
Solanum tuberosum ST4.03ch08 3 CH_stu_332 3 6 0.0000173222
Trifolium pratense Tp57577_TGAC_v2_LG6 3 CH_tpr_101 3 3 0.000000300841
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_397 2 2 0.000929238
Beta vulgaris Chr5_EL10_PGA_scaffold2 4 CH_bvu_266 2 2 0.000827917
Erigeron canadensis Conyza_canadensis_scaffold:4 4 CH_eca_483 2 2 0.000942317
Fragaria vesca Fvb5 4 CH_fve_367 2 2 0.000589102
Helianthus annuus HanXRQChr14 4 CH_han_143 4 5 0.000000000109057
Medicago truncatula chr7 4 CH_mtr_193 4 5 0.00000000104127
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_739 2 2 0.000597979
Solanum lycopersicum SL4.0ch01 4 CH_sly_145 4 5 0.0000000146903
Solanum tuberosum ST4.03ch12 4 CH_stu_331 3 6 0.0000173222
Solanum tuberosum ST4.03ch08 4 CH_stu_332 3 6 0.0000173222
Trifolium pratense Tp57577_TGAC_v2_LG6 4 CH_tpr_101 3 3 0.000000300841
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_397 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001