Functional clusters

Information

  • Type Gene Ontology
  • Description molecular transducer activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold134 3 CH_can_200 4 4 0.00000241285
Solanum tuberosum ST4.03ch01 3 CH_stu_322 4 4 0.0000132411
Capsicum annuum PGAv.1.6.scaffold134 4 CH_can_200 4 4 0.00000241285
Solanum tuberosum ST4.03ch01 4 CH_stu_322 4 4 0.0000132411

Available child term results

Ontology identifier Description Number of clusters
GO:0000156 phosphorelay response regulator activity 4
GO:0001653 peptide receptor activity 8
GO:0004675 transmembrane receptor protein serine/threonine kinase activity 24
GO:0004888 transmembrane signaling receptor activity 4
GO:0004970 ionotropic glutamate receptor activity 4
GO:0008066 glutamate receptor activity 50
GO:0008502 melatonin receptor activity 2
GO:0009881 photoreceptor activity 8
GO:0009885 transmembrane histidine kinase cytokinin receptor activity 2
GO:0009927 histidine phosphotransfer kinase activity 2
GO:0019199 transmembrane receptor protein kinase activity 30
GO:0038187 pattern recognition receptor activity 6
GO:0038199 ethylene receptor activity 2
GO:0045028 G protein-coupled purinergic nucleotide receptor activity 12
GO:0140376 innate immune receptor activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001