Functional clusters

Information

  • Type Gene Ontology
  • Description pectin metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr3 3 CH_camsi_421 3 8 0.00000988574
Sapria himalayana scaffold8_16897533 3 CH_shi_58 3 4 0.0000000784688
Camellia sinensis var. sinensis Chr3 4 CH_camsi_421 3 8 0.00000988574
Sapria himalayana scaffold8_16897533 4 CH_shi_58 3 4 0.0000000784688

Available child term results

Ontology identifier Description Number of clusters
GO:0010306 rhamnogalacturonan II biosynthetic process 6
GO:0010400 rhamnogalacturonan I side chain metabolic process 2
GO:0010401 pectic galactan metabolic process 4
GO:0045489 pectin biosynthetic process 10
GO:0045490 pectin catabolic process 10
GO:0048358 mucilage pectin biosynthetic process 4
GO:1900030 regulation of pectin biosynthetic process 2
GO:1902066 regulation of cell wall pectin metabolic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001