Functional clusters
Information
- Type Gene Ontology
- Description pectin catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erythranthe guttata | scaffold_13 | 3 | CH_egut_407 | 2 | 2 | 0.000728147 |
| Physcomitrium patens | Chr03 | 3 | CH_ppa_258 | 4 | 15 | 0.000951275 |
| Rhododendron simsii | chr12 | 3 | CH_rsi_448 | 2 | 2 | 0.000387184 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_646 | 3 | 3 | 0.000000199351 |
| Zea mays | 8 | 3 | CH_zma_242 | 3 | 4 | 0.000163394 |
| Erythranthe guttata | scaffold_13 | 4 | CH_egut_407 | 2 | 2 | 0.000728147 |
| Physcomitrium patens | Chr03 | 4 | CH_ppa_258 | 4 | 15 | 0.000951275 |
| Rhododendron simsii | chr12 | 4 | CH_rsi_448 | 2 | 2 | 0.000387184 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_646 | 3 | 3 | 0.000000199351 |
| Zea mays | 8 | 4 | CH_zma_242 | 3 | 4 | 0.000163394 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |