Functional clusters

Information

  • Type Gene Ontology
  • Description ion transmembrane transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chenopodium quinoa C_Quinoa_Scaffold_1480 3 CH_cqu_284 6 8 0.0000155645
Magnolia biondii Chr11 3 CH_mbi_587 7 44 0.000476356
Solanum tuberosum ST4.03ch06 3 CH_stu_649 5 8 0.000994189
Vanilla planifolia CM028157.1 3 CH_vpl_172 5 6 0.0000343356
Chenopodium quinoa C_Quinoa_Scaffold_1480 4 CH_cqu_284 6 8 0.0000155645
Magnolia biondii Chr11 4 CH_mbi_587 7 44 0.000476356
Solanum tuberosum ST4.03ch06 4 CH_stu_649 5 8 0.000994189
Vanilla planifolia CM028157.1 4 CH_vpl_172 5 6 0.0000343356

Available child term results

Ontology identifier Description Number of clusters
GO:0006824 cobalt ion transport 2
GO:0006849 plasma membrane pyruvate transport 4
GO:0006850 mitochondrial pyruvate transmembrane transport 24
GO:0006851 mitochondrial calcium ion transmembrane transport 16
GO:0010155 regulation of proton transport 26
GO:0010359 regulation of anion channel activity 22
GO:0015786 UDP-glucose transmembrane transport 2
GO:0015813 L-glutamate transmembrane transport 6
GO:0015986 ATP synthesis coupled proton transport 22
GO:0015990 electron transport coupled proton transport 2
GO:0034755 iron ion transmembrane transport 2
GO:0034775 glutathione transmembrane transport 18
GO:0035434 copper ion transmembrane transport 28
GO:0035435 phosphate ion transmembrane transport 8
GO:0048250 iron import into the mitochondrion 2
GO:0070574 cadmium ion transmembrane transport 4
GO:0071421 manganese ion transmembrane transport 6
GO:0071423 malate transmembrane transport 2
GO:0071577 zinc ion transmembrane transport 48
GO:0071578 zinc ion import across plasma membrane 2
GO:0071805 potassium ion transmembrane transport 36
GO:0072488 ammonium transmembrane transport 8
GO:0090414 molybdate ion export from vacuole 10
GO:0097638 L-arginine import across plasma membrane 10
GO:0098655 cation transmembrane transport 2
GO:0098661 inorganic anion transmembrane transport 2
GO:0098662 inorganic cation transmembrane transport 4
GO:0098705 copper ion import across plasma membrane 46
GO:0098711 iron ion import across plasma membrane 8
GO:0098712 L-glutamate import across plasma membrane 8
GO:0099587 inorganic ion import across plasma membrane 2
GO:0140021 mitochondrial ADP transmembrane transport 18
GO:1901017 negative regulation of potassium ion transmembrane transporter activity 10
GO:1901529 positive regulation of anion channel activity 8
GO:1901684 arsenate ion transmembrane transport 8
GO:1902358 sulfate transmembrane transport 60
GO:1902476 chloride transmembrane transport 10
GO:1902600 proton transmembrane transport 4
GO:1903400 L-arginine transmembrane transport 16
GO:1903401 L-lysine transmembrane transport 4
GO:1903424 fluoride transmembrane transport 18
GO:1903830 magnesium ion transmembrane transport 4
GO:1905011 transmembrane phosphate ion transport from cytosol to vacuole 2
GO:1990547 mitochondrial phosphate ion transmembrane transport 26
GO:1990569 UDP-N-acetylglucosamine transmembrane transport 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001