Functional clusters

Information

  • Type Gene Ontology
  • Description copper ion import across plasma membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_47 4 4 0.0000000000157678
Avicennia marina ScioBoG_17730_HRSCAF_17811 3 CH_ama_83 2 2 0.000258665
Amborella trichopoda AmTr_v1.0_scaffold00165 3 CH_atr_202 2 2 0.0000794407
Coffea canephora chr1 3 CH_ccan_261 2 5 0.000127766
Citrullus lanatus CG_Chr03 3 CH_cla_152 2 2 0.000532269
Corchorus olitorius AWUE01016544.1 3 CH_col_30 3 3 0.000000128001
Cucumis sativus L. chr1 3 CH_csa_153 3 14 0.000015207
Daucus carota DCARv2_Chr2 3 CH_dca_297 2 2 0.000191333
Durio zibethinus NW_019167871.1 3 CH_dzi_300 2 2 0.000463489
Gossypium raimondii Chr03 3 CH_gra_191 3 12 0.0000189547
Lupinus albus Lalb_Chr19 3 CH_lal_285 2 2 0.000157447
Lonicera japonica GWHAAZE00000003 3 CH_lonja_458 2 2 0.000179662
Medicago truncatula chr4 3 CH_mtr_427 3 32 0.0000125521
Populus trichocarpa Chr09 3 CH_ptr_401 2 2 0.000346801
Phaseolus vulgaris Chr11 3 CH_pvu_238 2 2 0.0000734727
Salix brachista GWHAAZH00000009 3 CH_sbr_283 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000012 3 CH_sci_212 2 2 0.000255428
Solanum lycopersicum SL4.0ch06 3 CH_sly_426 2 2 0.000176082
Schrenkiella parvula ch5-1 3 CH_spa_118 2 2 0.000078734
Solanum tuberosum ST4.03ch06 3 CH_stu_527 2 2 0.000307472
Theobroma cacao Chromosome_9 3 CH_tca_130 3 3 0.0000000321845
Trifolium pratense Tp57577_TGAC_v2_LG3 3 CH_tpr_214 2 2 0.0000756974
Vitis vinifera chr6 3 CH_vvi_128 3 4 0.0000000347135
Acer truncatum chr3 4 CH_acertr_47 4 4 0.0000000000157678
Avicennia marina ScioBoG_17730_HRSCAF_17811 4 CH_ama_83 2 2 0.000258665
Amborella trichopoda AmTr_v1.0_scaffold00165 4 CH_atr_202 2 2 0.0000794407
Coffea canephora chr1 4 CH_ccan_261 2 5 0.000127766
Citrullus lanatus CG_Chr03 4 CH_cla_152 2 2 0.000532269
Corchorus olitorius AWUE01016544.1 4 CH_col_30 3 3 0.000000128001
Cucumis sativus L. chr1 4 CH_csa_153 3 14 0.000015207
Daucus carota DCARv2_Chr2 4 CH_dca_297 2 2 0.000191333
Durio zibethinus NW_019167871.1 4 CH_dzi_300 2 2 0.000463489
Gossypium raimondii Chr03 4 CH_gra_191 3 12 0.0000189547
Lupinus albus Lalb_Chr19 4 CH_lal_285 2 2 0.000157447
Lonicera japonica GWHAAZE00000003 4 CH_lonja_458 2 2 0.000179662
Medicago truncatula chr4 4 CH_mtr_427 3 32 0.0000125521
Populus trichocarpa Chr09 4 CH_ptr_401 2 2 0.000346801
Phaseolus vulgaris Chr11 4 CH_pvu_238 2 2 0.0000734727
Salix brachista GWHAAZH00000009 4 CH_sbr_283 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000012 4 CH_sci_212 2 2 0.000255428
Solanum lycopersicum SL4.0ch06 4 CH_sly_426 2 2 0.000176082
Schrenkiella parvula ch5-1 4 CH_spa_118 2 2 0.000078734
Solanum tuberosum ST4.03ch06 4 CH_stu_527 2 2 0.000307472
Theobroma cacao Chromosome_9 4 CH_tca_130 3 3 0.0000000321845
Trifolium pratense Tp57577_TGAC_v2_LG3 4 CH_tpr_214 2 2 0.0000756974
Vitis vinifera chr6 4 CH_vvi_128 3 4 0.0000000347135

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001