Functional clusters
Information
- Type Gene Ontology
- Description regulation of proton transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_302 | 2 | 2 | 0.000801989 |
| Corylus avellana | 5 | 3 | CH_cav_328 | 2 | 2 | 0.000230008 |
| Cucumis melo | chr11 | 3 | CH_cme_105 | 3 | 3 | 0.000000373844 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_98 | 3 | 3 | 0.000000104528 |
| Gossypium hirsutum | D05 | 3 | CH_ghi_264 | 4 | 24 | 0.000000432985 |
| Glycine max | Gm01 | 3 | CH_gma_522 | 2 | 2 | 0.00079707 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_129 | 4 | 18 | 0.000000177905 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_592 | 2 | 2 | 0.000231857 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 3 | CH_lsa_485 | 2 | 2 | 0.00077101 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_104 | 4 | 8 | 0.00000000310397 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_997 | 2 | 2 | 0.0000487151 |
| Sapria himalayana | scaffold27_7528638 | 3 | CH_shi_155 | 2 | 2 | 0.0000571804 |
| Selenicereus undatus | Scaffold_33673 | 3 | CH_sun_190 | 2 | 2 | 0.000435983 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_302 | 2 | 2 | 0.000801989 |
| Corylus avellana | 5 | 4 | CH_cav_328 | 2 | 2 | 0.000230008 |
| Cucumis melo | chr11 | 4 | CH_cme_105 | 3 | 3 | 0.000000373844 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_98 | 3 | 3 | 0.000000104528 |
| Gossypium hirsutum | D05 | 4 | CH_ghi_264 | 4 | 24 | 0.000000432985 |
| Glycine max | Gm01 | 4 | CH_gma_522 | 2 | 2 | 0.00079707 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_129 | 4 | 18 | 0.000000177905 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_592 | 2 | 2 | 0.000231857 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 4 | CH_lsa_485 | 2 | 2 | 0.00077101 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_104 | 4 | 8 | 0.00000000310397 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_997 | 2 | 2 | 0.0000487151 |
| Sapria himalayana | scaffold27_7528638 | 4 | CH_shi_155 | 2 | 2 | 0.0000571804 |
| Selenicereus undatus | Scaffold_33673 | 4 | CH_sun_190 | 2 | 2 | 0.000435983 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |