Functional clusters

Information

  • Type Gene Ontology
  • Description enzyme binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 3 CH_ach_148 4 4 0.00010414
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 3 CH_amhyb_165 9 77 0.000252614
Actinidia chinensis Lachesis_group17 4 CH_ach_148 4 4 0.00010414
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 4 CH_amhyb_165 9 77 0.000252614

Available child term results

Ontology identifier Description Number of clusters
GO:0000993 RNA polymerase II complex binding 4
GO:0002020 protease binding 8
GO:0017151 DEAD/H-box RNA helicase binding 6
GO:0019900 kinase binding 2
GO:0019901 protein kinase binding 6
GO:0019902 phosphatase binding 2
GO:0019903 protein phosphatase binding 4
GO:0031267 small GTPase binding 14
GO:0031624 ubiquitin conjugating enzyme binding 10
GO:0031625 ubiquitin protein ligase binding 78
GO:0036313 phosphatidylinositol 3-kinase catalytic subunit binding 6
GO:0042826 histone deacetylase binding 2
GO:0043175 RNA polymerase core enzyme binding 6
GO:0043424 protein histidine kinase binding 24
GO:0051019 mitogen-activated protein kinase binding 2
GO:0070063 RNA polymerase binding 2
GO:0070182 DNA polymerase binding 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001