Functional clusters
Information
- Type Gene Ontology
- Description protein histidine kinase binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 3 | CH_acertr_247 | 3 | 3 | 0.0000132028 |
| Brassica rapa | A01 | 3 | CH_bra_33 | 5 | 5 | 0.00000000000709023 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 3 | CH_bvu_112 | 4 | 8 | 0.00000126293 |
| Chlamydomonas reinhardtii | chromosome_1 | 3 | CH_cre_83 | 3 | 8 | 0.000394492 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 3 | CH_eca_205 | 3 | 3 | 0.0000088345 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_629 | 3 | 3 | 0.0000230969 |
| Glycine max | Gm02 | 3 | CH_gma_507 | 3 | 6 | 0.000746053 |
| Medicago truncatula | chr4 | 3 | CH_mtr_172 | 5 | 9 | 0.000000000264253 |
| Nicotiana tabacum | Nitab4.5_0000269 | 3 | CH_nta_128 | 3 | 9 | 0.000550557 |
| Papaver somniferum | NW_020620714.1 | 3 | CH_pso_379 | 3 | 3 | 0.0000115576 |
| Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_500 | 4 | 49 | 0.000878168 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_1034 | 3 | 4 | 0.0000776453 |
| Acer truncatum | chr8 | 4 | CH_acertr_247 | 3 | 3 | 0.0000132028 |
| Brassica rapa | A01 | 4 | CH_bra_33 | 5 | 5 | 0.00000000000709023 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 4 | CH_bvu_112 | 4 | 8 | 0.00000126293 |
| Chlamydomonas reinhardtii | chromosome_1 | 4 | CH_cre_83 | 3 | 8 | 0.000394492 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 4 | CH_eca_205 | 3 | 3 | 0.0000088345 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_629 | 3 | 3 | 0.0000230969 |
| Glycine max | Gm02 | 4 | CH_gma_507 | 3 | 6 | 0.000746053 |
| Medicago truncatula | chr4 | 4 | CH_mtr_172 | 5 | 9 | 0.000000000264253 |
| Nicotiana tabacum | Nitab4.5_0000269 | 4 | CH_nta_128 | 3 | 9 | 0.000550557 |
| Papaver somniferum | NW_020620714.1 | 4 | CH_pso_379 | 3 | 3 | 0.0000115576 |
| Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_500 | 4 | 49 | 0.000878168 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_1034 | 3 | 4 | 0.0000776453 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |