Functional clusters

Information

  • Type Gene Ontology
  • Description photosynthesis, light reaction

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold129 3 CH_can_386 4 5 0.000250458
Striga asiatica scaffold479 3 CH_sas_66 4 6 0.0000868959
Capsicum annuum PGAv.1.6.scaffold129 4 CH_can_386 4 5 0.000250458
Striga asiatica scaffold479 4 CH_sas_66 4 6 0.0000868959

Available child term results

Ontology identifier Description Number of clusters
GO:0009765 photosynthesis, light harvesting 110
GO:0009767 photosynthetic electron transport chain 6
GO:0009768 photosynthesis, light harvesting in photosystem I 8
GO:0009769 photosynthesis, light harvesting in photosystem II 38
GO:0009773 photosynthetic electron transport in photosystem I 2
GO:0009780 photosynthetic NADP+ reduction 4
GO:0010205 photoinhibition 6
GO:0010206 photosystem II repair 2
GO:0010270 photosystem II oxygen evolving complex assembly 8
GO:0042549 photosystem II stabilization 2
GO:0042550 photosystem I stabilization 2
GO:0048564 photosystem I assembly 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001