Functional clusters

Information

  • Type Gene Ontology
  • Description organophosphate metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erythranthe guttata scaffold_12 3 CH_egut_256 10 42 0.0000454958
Simmondsia chinensis GWHAASQ00000014 3 CH_sci_125 7 13 0.0000218043
Erythranthe guttata scaffold_12 4 CH_egut_256 10 42 0.0000454958
Simmondsia chinensis GWHAASQ00000014 4 CH_sci_125 7 13 0.0000218043

Available child term results

Ontology identifier Description Number of clusters
GO:0006002 fructose 6-phosphate metabolic process 8
GO:0006003 fructose 2,6-bisphosphate metabolic process 16
GO:0006085 acetyl-CoA biosynthetic process 2
GO:0006096 glycolytic process 20
GO:0006104 succinyl-CoA metabolic process 6
GO:0006110 regulation of glycolytic process 2
GO:0006167 AMP biosynthetic process 8
GO:0006176 dATP biosynthetic process from ADP 4
GO:0006182 cGMP biosynthetic process 6
GO:0006183 GTP biosynthetic process 4
GO:0006189 'de novo' IMP biosynthetic process 4
GO:0006226 dUMP biosynthetic process 6
GO:0006228 UTP biosynthetic process 2
GO:0006231 dTMP biosynthetic process 2
GO:0006233 dTDP biosynthetic process 4
GO:0006506 GPI anchor biosynthetic process 14
GO:0006644 phospholipid metabolic process 2
GO:0006654 phosphatidic acid biosynthetic process 4
GO:0006656 phosphatidylcholine biosynthetic process 2
GO:0006661 phosphatidylinositol biosynthetic process 2
GO:0006741 NADP biosynthetic process 16
GO:0006747 FAD biosynthetic process 2
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 2
GO:0008654 phospholipid biosynthetic process 4
GO:0009127 purine nucleoside monophosphate biosynthetic process 2
GO:0009134 nucleoside diphosphate catabolic process 2
GO:0009143 nucleoside triphosphate catabolic process 14
GO:0009152 purine ribonucleotide biosynthetic process 2
GO:0009166 nucleotide catabolic process 2
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process 2
GO:0009190 cyclic nucleotide biosynthetic process 2
GO:0009202 deoxyribonucleoside triphosphate biosynthetic process 2
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 2
GO:0009229 thiamine diphosphate biosynthetic process 2
GO:0009263 deoxyribonucleotide biosynthetic process 4
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 12
GO:0010513 positive regulation of phosphatidylinositol biosynthetic process 2
GO:0015936 coenzyme A metabolic process 10
GO:0015938 coenzyme A catabolic process 2
GO:0015966 diadenosine tetraphosphate biosynthetic process 2
GO:0015969 guanosine tetraphosphate metabolic process 6
GO:0015986 ATP synthesis coupled proton transport 22
GO:0016024 CDP-diacylglycerol biosynthetic process 2
GO:0016255 attachment of GPI anchor to protein 14
GO:0019365 pyridine nucleotide salvage 6
GO:0019427 acetyl-CoA biosynthetic process from acetate 2
GO:0030388 fructose 1,6-bisphosphate metabolic process 20
GO:0032049 cardiolipin biosynthetic process 8
GO:0032264 IMP salvage 18
GO:0032324 molybdopterin cofactor biosynthetic process 4
GO:0033512 L-lysine catabolic process to acetyl-CoA via saccharopine 2
GO:0033866 nucleoside bisphosphate biosynthetic process 2
GO:0034355 NAD salvage 2
GO:0035336 long-chain fatty-acyl-CoA metabolic process 6
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process 4
GO:0044205 'de novo' UMP biosynthetic process 2
GO:0044209 AMP salvage 8
GO:0045337 farnesyl diphosphate biosynthetic process 2
GO:0045338 farnesyl diphosphate metabolic process 6
GO:0045339 farnesyl diphosphate catabolic process 14
GO:0046167 glycerol-3-phosphate biosynthetic process 4
GO:0046168 glycerol-3-phosphate catabolic process 2
GO:0046337 phosphatidylethanolamine metabolic process 2
GO:0046434 organophosphate catabolic process 6
GO:0046470 phosphatidylcholine metabolic process 2
GO:0046473 phosphatidic acid metabolic process 4
GO:0046488 phosphatidylinositol metabolic process 2
GO:0046710 GDP metabolic process 2
GO:0046854 phosphatidylinositol phosphate biosynthetic process 2
GO:0046855 inositol phosphate dephosphorylation 4
GO:0046856 phosphatidylinositol dephosphorylation 8
GO:0046949 fatty-acyl-CoA biosynthetic process 4
GO:0080020 regulation of coenzyme A biosynthetic process 4
GO:0106046 guanine deglycation, glyoxal removal 2
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1901293 nucleoside phosphate biosynthetic process 2
GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process 6
GO:1903730 regulation of phosphatidate phosphatase activity 6
GO:2001294 malonyl-CoA catabolic process 18

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001