Functional clusters

Information

  • Type Gene Ontology
  • Description carbon-oxygen lyase activity, acting on phosphates

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_148 6 70 0.000353777
Arabidopsis lyrata scaffold_1 3 CH_aly_108 4 6 0.000000406588
Arabidopsis lyrata scaffold_8 3 CH_aly_179 3 3 0.0000293752
Cardamine hirsuta Chr1 3 CH_chi_186 4 8 0.0000186743
Cardamine hirsuta Chr6 3 CH_chi_77 5 6 0.0000000026664
Capsella rubella scaffold_8 3 CH_cru_22 7 8 0.00000000000000179344
Eutrema salsugineum scaffold_7 3 CH_esa_251 3 7 0.000614634
Eutrema salsugineum scaffold_20 3 CH_esa_58 4 4 0.0000000140782
Marchantia polymorpha scaffold_34 3 CH_mpo_13 8 33 0.000000000000928254
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_148 6 70 0.000353777
Arabidopsis lyrata scaffold_1 4 CH_aly_108 4 6 0.000000406588
Arabidopsis lyrata scaffold_8 4 CH_aly_179 3 3 0.0000293752
Cardamine hirsuta Chr1 4 CH_chi_186 4 8 0.0000186743
Cardamine hirsuta Chr6 4 CH_chi_77 5 6 0.0000000026664
Capsella rubella scaffold_8 4 CH_cru_22 7 8 0.00000000000000179344
Eutrema salsugineum scaffold_7 4 CH_esa_251 3 7 0.000614634
Eutrema salsugineum scaffold_20 4 CH_esa_58 4 4 0.0000000140782
Marchantia polymorpha scaffold_34 4 CH_mpo_13 8 33 0.000000000000928254

Available child term results

Ontology identifier Description Number of clusters
GO:0003856 3-dehydroquinate synthase activity 10
GO:0004107 chorismate synthase activity 24
GO:0009899 ent-kaurene synthase activity 34
GO:0010333 terpene synthase activity 480
GO:0010334 sesquiterpene synthase activity 2
GO:0034002 (R)-limonene synthase activity 8
GO:0034007 S-linalool synthase activity 22
GO:0034768 (E)-beta-ocimene synthase activity 2
GO:0050551 myrcene synthase activity 2
GO:0052578 alpha-farnesene synthase activity 30
GO:0052683 (Z)-gamma-bisabolene synthase activity 2
GO:0080013 (E,E)-geranyllinalool synthase activity 42
GO:0080016 (-)-E-beta-caryophyllene synthase activity 14
GO:0102878 (+)-alpha-barbatene synthase activity 20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001