Functional clusters
Information
- Type Gene Ontology
- Description alpha-farnesene synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_7 | 3 | CH_aly_279 | 2 | 4 | 0.000396 |
| Arabidopsis thaliana | Chr4 | 3 | CH_ath_413 | 2 | 3 | 0.0000859463 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 3 | CH_atr_288 | 2 | 2 | 0.000476644 |
| Cannabis sativa | NC_044374.1 | 3 | CH_cansat_45 | 4 | 4 | 0.000000000000849474 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_136 | 2 | 2 | 0.000236939 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 3 | CH_cqu_421 | 2 | 2 | 0.000284293 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 3 | CH_cqu_422 | 2 | 2 | 0.000284293 |
| Capsella rubella | scaffold_7 | 3 | CH_cru_212 | 2 | 2 | 0.0000731154 |
| Davidia involucrata | GWHABJS00000002 | 3 | CH_din_90 | 3 | 5 | 0.0000000150075 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_139 | 7 | 40 | 5.89804e-17 |
| Phaseolus vulgaris | Chr11 | 3 | CH_pvu_110 | 3 | 5 | 0.0000000809706 |
| Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_176 | 3 | 3 | 0.0000000621034 |
| Simmondsia chinensis | GWHAASQ00000021 | 3 | CH_sci_65 | 3 | 6 | 0.000000217459 |
| Theobroma cacao | Chromosome_3 | 3 | CH_tca_319 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010966021.1 | 3 | CH_tha_181 | 2 | 2 | 0.00069847 |
| Arabidopsis lyrata | scaffold_7 | 4 | CH_aly_279 | 2 | 4 | 0.000396 |
| Arabidopsis thaliana | Chr4 | 4 | CH_ath_413 | 2 | 3 | 0.0000859463 |
| Amborella trichopoda | AmTr_v1.0_scaffold00007 | 4 | CH_atr_288 | 2 | 2 | 0.000476644 |
| Cannabis sativa | NC_044374.1 | 4 | CH_cansat_45 | 4 | 4 | 0.000000000000849474 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_136 | 2 | 2 | 0.000236939 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 4 | CH_cqu_421 | 2 | 2 | 0.000284293 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 4 | CH_cqu_422 | 2 | 2 | 0.000284293 |
| Capsella rubella | scaffold_7 | 4 | CH_cru_212 | 2 | 2 | 0.0000731154 |
| Davidia involucrata | GWHABJS00000002 | 4 | CH_din_90 | 3 | 5 | 0.0000000150075 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_139 | 7 | 40 | 5.89804e-17 |
| Phaseolus vulgaris | Chr11 | 4 | CH_pvu_110 | 3 | 5 | 0.0000000809706 |
| Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_176 | 3 | 3 | 0.0000000621034 |
| Simmondsia chinensis | GWHAASQ00000021 | 4 | CH_sci_65 | 3 | 6 | 0.000000217459 |
| Theobroma cacao | Chromosome_3 | 4 | CH_tca_319 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010966021.1 | 4 | CH_tha_181 | 2 | 2 | 0.00069847 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |