Functional clusters

Information

  • Type Gene Ontology
  • Description chorismate synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102831_HRSCAF_103044 3 CH_ama_92 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold186 3 CH_can_307 2 2 0.0000826105
Coffea canephora chr9 3 CH_ccan_169 2 4 0.0000127767
Erythranthe guttata scaffold_6 3 CH_egut_287 2 2 0.0000728147
Fragaria x ananassa Fvb4-3 3 CH_fan_528 2 2 0.00066613
Gossypium hirsutum D10 3 CH_ghi_212 3 3 0.0000000598905
Gossypium hirsutum A10 3 CH_ghi_650 2 2 0.000747644
Gossypium hirsutum D05 3 CH_ghi_651 2 2 0.000747644
Glycine max Gm14 3 CH_gma_386 2 2 0.000227734
Gossypium raimondii Chr11 3 CH_gra_258 2 2 0.000160832
Malus domestica Chr01 3 CH_mdo_668 2 4 0.000682538
Sapria himalayana scaffold12_13443846 3 CH_shi_193 2 3 0.000171536
Avicennia marina ScioBoG_102831_HRSCAF_103044 4 CH_ama_92 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold186 4 CH_can_307 2 2 0.0000826105
Coffea canephora chr9 4 CH_ccan_169 2 4 0.0000127767
Erythranthe guttata scaffold_6 4 CH_egut_287 2 2 0.0000728147
Fragaria x ananassa Fvb4-3 4 CH_fan_528 2 2 0.00066613
Gossypium hirsutum D10 4 CH_ghi_212 3 3 0.0000000598905
Gossypium hirsutum A10 4 CH_ghi_650 2 2 0.000747644
Gossypium hirsutum D05 4 CH_ghi_651 2 2 0.000747644
Glycine max Gm14 4 CH_gma_386 2 2 0.000227734
Gossypium raimondii Chr11 4 CH_gra_258 2 2 0.000160832
Malus domestica Chr01 4 CH_mdo_668 2 4 0.000682538
Sapria himalayana scaffold12_13443846 4 CH_shi_193 2 3 0.000171536

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001