Functional clusters
Information
- Type Gene Ontology
- Description oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Quercus lobata | 1 | 3 | CH_qlo_858 | 3 | 3 | 0.000209493 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_143 | 4 | 4 | 0.000000107718 |
| Utricularia gibba | unitig_26 | 3 | CH_ugi_27 | 4 | 10 | 0.000000347591 |
| Quercus lobata | 1 | 4 | CH_qlo_858 | 3 | 3 | 0.000209493 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_143 | 4 | 4 | 0.000000107718 |
| Utricularia gibba | unitig_26 | 4 | CH_ugi_27 | 4 | 10 | 0.000000347591 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004097 | catechol oxidase activity | 156 |
| GO:0008447 | L-ascorbate oxidase activity | 22 |
| GO:0009916 | alternative oxidase activity | 28 |
| GO:0052716 | hydroquinone:oxygen oxidoreductase activity | 136 |
| GO:0102721 | ubiquinol:oxygen oxidoreductase activity | 14 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |