Functional clusters

Information

  • Type Gene Ontology
  • Description catechol oxidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_1 13 37 9.6331e-24
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 3 CH_amhyb_47 3 3 0.000000106286
Aquilegia oxysepala CHR01 3 CH_aox_25 5 14 0.000000000156277
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 3 CH_arhy_573 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 3 CH_arhy_706 2 3 0.000898109
Beta vulgaris Chr8_EL10_PGA_scaffold4 3 CH_bvu_4 10 15 1.11329e-27
Cannabis sativa NC_044371.1 3 CH_cansat_170 3 8 0.0000126687
Capsicum annuum PGAv.1.6.scaffold195 3 CH_can_41 7 15 5.31065e-17
Corylus avellana 2 3 CH_cav_115 4 43 0.000000166625
Chara braunii BFEA01000405 3 CH_cbr_166 3 10 0.000631426
Chara braunii BFEA01000592 3 CH_cbr_93 3 5 0.0000527278
Coffea canephora chr5 3 CH_ccan_183 3 50 0.0000186569
Carpinus fangiana Cfa01 3 CH_cfa_49 4 4 0.0000000000195499
Carya illinoinensis Chr09 3 CH_cil_393 2 3 0.000185943
Citrullus lanatus CG_Chr03 3 CH_cla_1 9 11 2.99381e-28
Cucumis melo chr12 3 CH_cme_95 3 4 0.000000106806
Chenopodium quinoa C_Quinoa_Scaffold_3787 3 CH_cqu_527 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2947 3 CH_cqu_528 2 2 0.000710732
Cucumis sativus L. chr1 3 CH_csa_13 6 8 2.55442e-18
Daucus carota DCARv2_Chr5 3 CH_dca_117 3 3 0.000000122031
Durio zibethinus NW_019168015.1 3 CH_dzi_302 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_100 4 10 0.0000000281498
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_50 4 4 0.00000000013418
Eucalyptus grandis Chr04 3 CH_egr_676 2 2 0.0000585274
Erythranthe guttata scaffold_13 3 CH_egut_49 6 11 0.00000000000000446628
Fragaria x ananassa Fvb3-2 3 CH_fan_181 3 3 0.000000497659
Fragaria x ananassa Fvb3-4 3 CH_fan_220 3 4 0.0000019904
Fragaria x ananassa Fvb3-3 3 CH_fan_33 5 9 0.00000000000128761
Fragaria x ananassa Fvb3-1 3 CH_fan_93 4 7 0.0000000025775
Fragaria vesca Fvb3 3 CH_fve_31 5 5 0.00000000000000505926
Glycine max Gm13 3 CH_gma_244 3 5 0.0000120966
Glycine max Gm13 3 CH_gma_295 3 7 0.0000423209
Glycine max Gm07 3 CH_gma_94 4 5 0.00000000149256
Helianthus annuus HanXRQChr11 3 CH_han_195 4 9 0.00000000719386
Hydrangea macrophylla Hma1.2p1_0191F.1 3 CH_hma_7 8 12 5.37254e-21
Lupinus albus Lalb_Chr20 3 CH_lal_288 2 2 0.000157447
Lotus japonicus chr6 3 CH_lja_277 2 2 0.000214523
Lonicera japonica GWHAAZE00000001 3 CH_lonja_41 8 12 2.13258e-22
Lactuca sativa Lsat_1_v8_lg_4 3 CH_lsa_125 4 4 0.00000000124676
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_315 3 5 0.0000323189
Lactuca sativa Lsat_1_v8_lg_9 3 CH_lsa_63 6 14 0.000000000000449114
Magnolia biondii Chr18 3 CH_mbi_314 4 14 0.00000511995
Magnolia biondii Chr05 3 CH_mbi_4 12 16 1.4575e-32
Malus domestica Chr05 3 CH_mdo_11 9 20 2.47203e-23
Malus domestica Chr10 3 CH_mdo_16 8 13 1.11083e-21
Marchantia polymorpha scaffold_145 3 CH_mpo_31 5 7 0.0000000175061
Marchantia polymorpha scaffold_38 3 CH_mpo_47 4 4 0.000000409337
Marchantia polymorpha scaffold_121 3 CH_mpo_51 4 5 0.00000204322
Marchantia polymorpha scaffold_21 3 CH_mpo_70 4 8 0.0000284604
Medicago truncatula chr2 3 CH_mtr_620 2 2 0.000246518
Olea europaea chr21 3 CH_oeu_17 5 7 0.0000000000010125
Oryza sativa ssp. japonica chr04 3 CH_osa_285 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00445 3 CH_pax_115 3 7 0.00000103926
Prunus persica Pp04 3 CH_ppe_22 7 8 8.6885e-22
Populus trichocarpa Chr01 3 CH_ptr_23 8 10 9.17666e-23
Quercus lobata 10 3 CH_qlo_939 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_187 4 12 0.00000000141074
Striga asiatica scaffold130 3 CH_sas_117 2 2 0.000938057
Salvia bowleyana GWHASIU00000004 3 CH_sbo_158 6 66 0.0000000212276
Salvia bowleyana GWHASIU00000005 3 CH_sbo_458 3 10 0.000494442
Salvia bowleyana GWHASIU00000004 3 CH_sbo_70 8 60 0.0000000000000809122
Salix brachista GWHAAZH00000016 3 CH_sbr_385 2 2 0.000945209
Salix brachista GWHAAZH00000004 3 CH_sbr_386 2 2 0.000945209
Sequoiadendron giganteum chr6 3 CH_sgi_72 9 11 1.20259e-25
Sequoiadendron giganteum chr8 3 CH_sgi_771 3 3 0.00000290482
Sequoiadendron giganteum chr10 3 CH_sgi_855 3 4 0.0000116158
Solanum lycopersicum SL4.0ch08 3 CH_sly_14 8 11 1.12303e-24
Selaginella moellendorffii scaffold_32 3 CH_smo_90 3 4 0.0000292794
Selaginella moellendorffii scaffold_112 3 CH_smo_91 3 4 0.0000292794
Solanum pennellii Spenn-ch08 3 CH_spe_7 8 11 1.61166e-25
Solanum tuberosum ST4.03ch08 3 CH_stu_16 9 16 7.71511e-27
Trochodendron aralioides group3 3 CH_tar_448 2 2 0.000600366
Theobroma cacao Chromosome_6 3 CH_tca_25 6 8 2.78791e-16
Tripterygium wilfordii NC_052253.1 3 CH_twi_210 2 2 0.000055788
Utricularia gibba unitig_27 3 CH_ugi_74 2 2 0.0000820479
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_347 2 2 0.000557543
Vigna mungo CM024069.1 3 CH_vmu_272 2 2 0.000387685
Vanilla planifolia CM028157.1 3 CH_vpl_49 4 12 0.00000000299388
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_1 13 37 9.6331e-24
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 4 CH_amhyb_47 3 3 0.000000106286
Aquilegia oxysepala CHR01 4 CH_aox_25 5 14 0.000000000156277
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 4 CH_arhy_573 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 4 CH_arhy_706 2 3 0.000898109
Beta vulgaris Chr8_EL10_PGA_scaffold4 4 CH_bvu_4 10 15 1.11329e-27
Cannabis sativa NC_044371.1 4 CH_cansat_170 3 8 0.0000126687
Capsicum annuum PGAv.1.6.scaffold195 4 CH_can_41 7 15 5.31065e-17
Corylus avellana 2 4 CH_cav_115 4 43 0.000000166625
Chara braunii BFEA01000405 4 CH_cbr_166 3 10 0.000631426
Chara braunii BFEA01000592 4 CH_cbr_93 3 5 0.0000527278
Coffea canephora chr5 4 CH_ccan_183 3 50 0.0000186569
Carpinus fangiana Cfa01 4 CH_cfa_49 4 4 0.0000000000195499
Carya illinoinensis Chr09 4 CH_cil_393 2 3 0.000185943
Citrullus lanatus CG_Chr03 4 CH_cla_1 9 11 2.99381e-28
Cucumis melo chr12 4 CH_cme_95 3 4 0.000000106806
Chenopodium quinoa C_Quinoa_Scaffold_3787 4 CH_cqu_527 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2947 4 CH_cqu_528 2 2 0.000710732
Cucumis sativus L. chr1 4 CH_csa_13 6 8 2.55442e-18
Daucus carota DCARv2_Chr5 4 CH_dca_117 3 3 0.000000122031
Durio zibethinus NW_019168015.1 4 CH_dzi_302 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_100 4 10 0.0000000281498
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_50 4 4 0.00000000013418
Eucalyptus grandis Chr04 4 CH_egr_676 2 2 0.0000585274
Erythranthe guttata scaffold_13 4 CH_egut_49 6 11 0.00000000000000446628
Fragaria x ananassa Fvb3-2 4 CH_fan_181 3 3 0.000000497659
Fragaria x ananassa Fvb3-4 4 CH_fan_220 3 4 0.0000019904
Fragaria x ananassa Fvb3-3 4 CH_fan_33 5 9 0.00000000000128761
Fragaria x ananassa Fvb3-1 4 CH_fan_93 4 7 0.0000000025775
Fragaria vesca Fvb3 4 CH_fve_31 5 5 0.00000000000000505926
Glycine max Gm13 4 CH_gma_244 3 5 0.0000120966
Glycine max Gm13 4 CH_gma_295 3 7 0.0000423209
Glycine max Gm07 4 CH_gma_94 4 5 0.00000000149256
Helianthus annuus HanXRQChr11 4 CH_han_195 4 9 0.00000000719386
Hydrangea macrophylla Hma1.2p1_0191F.1 4 CH_hma_7 8 12 5.37254e-21
Lupinus albus Lalb_Chr20 4 CH_lal_288 2 2 0.000157447
Lotus japonicus chr6 4 CH_lja_277 2 2 0.000214523
Lonicera japonica GWHAAZE00000001 4 CH_lonja_41 8 12 2.13258e-22
Lactuca sativa Lsat_1_v8_lg_4 4 CH_lsa_125 4 4 0.00000000124676
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_315 3 5 0.0000323189
Lactuca sativa Lsat_1_v8_lg_9 4 CH_lsa_63 6 14 0.000000000000449114
Magnolia biondii Chr18 4 CH_mbi_314 4 14 0.00000511995
Magnolia biondii Chr05 4 CH_mbi_4 12 16 1.4575e-32
Malus domestica Chr05 4 CH_mdo_11 9 20 2.47203e-23
Malus domestica Chr10 4 CH_mdo_16 8 13 1.11083e-21
Marchantia polymorpha scaffold_145 4 CH_mpo_31 5 7 0.0000000175061
Marchantia polymorpha scaffold_38 4 CH_mpo_47 4 4 0.000000409337
Marchantia polymorpha scaffold_121 4 CH_mpo_51 4 5 0.00000204322
Marchantia polymorpha scaffold_21 4 CH_mpo_70 4 8 0.0000284604
Medicago truncatula chr2 4 CH_mtr_620 2 2 0.000246518
Olea europaea chr21 4 CH_oeu_17 5 7 0.0000000000010125
Oryza sativa ssp. japonica chr04 4 CH_osa_285 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00445 4 CH_pax_115 3 7 0.00000103926
Prunus persica Pp04 4 CH_ppe_22 7 8 8.6885e-22
Populus trichocarpa Chr01 4 CH_ptr_23 8 10 9.17666e-23
Quercus lobata 10 4 CH_qlo_939 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_187 4 12 0.00000000141074
Striga asiatica scaffold130 4 CH_sas_117 2 2 0.000938057
Salvia bowleyana GWHASIU00000004 4 CH_sbo_158 6 66 0.0000000212276
Salvia bowleyana GWHASIU00000005 4 CH_sbo_458 3 10 0.000494442
Salvia bowleyana GWHASIU00000004 4 CH_sbo_70 8 60 0.0000000000000809122
Salix brachista GWHAAZH00000016 4 CH_sbr_385 2 2 0.000945209
Salix brachista GWHAAZH00000004 4 CH_sbr_386 2 2 0.000945209
Sequoiadendron giganteum chr6 4 CH_sgi_72 9 11 1.20259e-25
Sequoiadendron giganteum chr8 4 CH_sgi_771 3 3 0.00000290482
Sequoiadendron giganteum chr10 4 CH_sgi_855 3 4 0.0000116158
Solanum lycopersicum SL4.0ch08 4 CH_sly_14 8 11 1.12303e-24
Selaginella moellendorffii scaffold_32 4 CH_smo_90 3 4 0.0000292794
Selaginella moellendorffii scaffold_112 4 CH_smo_91 3 4 0.0000292794
Solanum pennellii Spenn-ch08 4 CH_spe_7 8 11 1.61166e-25
Solanum tuberosum ST4.03ch08 4 CH_stu_16 9 16 7.71511e-27
Trochodendron aralioides group3 4 CH_tar_448 2 2 0.000600366
Theobroma cacao Chromosome_6 4 CH_tca_25 6 8 2.78791e-16
Tripterygium wilfordii NC_052253.1 4 CH_twi_210 2 2 0.000055788
Utricularia gibba unitig_27 4 CH_ugi_74 2 2 0.0000820479
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_347 2 2 0.000557543
Vigna mungo CM024069.1 4 CH_vmu_272 2 2 0.000387685
Vanilla planifolia CM028157.1 4 CH_vpl_49 4 12 0.00000000299388

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001