Functional clusters

Information

  • Type Gene Ontology
  • Description oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 3 CH_aag_124 3 4 0.000173572
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_261 5 7 0.0000000696862
Amborella trichopoda AmTr_v1.0_scaffold00177 3 CH_atr_89 4 4 0.0000000886043
Beta vulgaris Chr6_EL10_PGA_scaffold0 3 CH_bvu_199 3 3 0.000189438
Chara braunii BFEA01000201 3 CH_cbr_8 7 10 0.00000000000000203895
Carpinus fangiana Cfa01 3 CH_cfa_189 4 7 0.0000143592
Eucalyptus grandis Chr02 3 CH_egr_702 4 9 0.0000650135
Fragaria x ananassa Fvb1-3 3 CH_fan_171 4 4 0.000000395556
Fragaria vesca Fvb1 3 CH_fve_338 3 4 0.000459678
Fragaria vesca Fvb6 3 CH_fve_95 5 7 0.00000000491914
Glycine max Gm06 3 CH_gma_452 3 3 0.000479341
Glycine max Gm09 3 CH_gma_453 3 3 0.000479341
Helianthus annuus HanXRQChr11 3 CH_han_418 5 21 0.0000249968
Helianthus annuus HanXRQChr14 3 CH_han_70 7 8 0.0000000000000335363
Lupinus albus Lalb_Chr07 3 CH_lal_319 3 3 0.000267834
Malus domestica Chr02 3 CH_mdo_233 4 4 0.000000272193
Pisum sativum chr7LG7 3 CH_psa_305 4 13 0.000309198
Quercus lobata 3 3 CH_qlo_487 4 4 0.000000475081
Quercus lobata CM012294 3 CH_qlo_869 3 3 0.000259193
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_283 4 4 0.000000164322
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_430 4 8 0.000011454
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_605 3 3 0.000124902
Rhododendron simsii chr07 3 CH_rsi_491 3 4 0.00061897
Sequoiadendron giganteum chr3 3 CH_sgi_1304 3 3 0.000524862
Sequoiadendron giganteum chr4 3 CH_sgi_325 7 12 0.0000000000106089
Selenicereus undatus Scaffold_19641 3 CH_sun_41 4 4 0.000000171512
Trochodendron aralioides group0 3 CH_tar_176 4 5 0.00000147545
Theobroma cacao Chromosome_3 3 CH_tca_379 3 4 0.000710295
Vanilla planifolia CM028153.1 3 CH_vpl_91 5 14 0.000000332009
Vitis vinifera chr19 3 CH_vvi_343 3 3 0.000240573
Zea mays 10 3 CH_zma_95 5 9 0.000000103444
Anthoceros agrestis Sc2ySwM_362 4 CH_aag_124 3 4 0.000173572
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_261 5 7 0.0000000696862
Amborella trichopoda AmTr_v1.0_scaffold00177 4 CH_atr_89 4 4 0.0000000886043
Beta vulgaris Chr6_EL10_PGA_scaffold0 4 CH_bvu_199 3 3 0.000189438
Chara braunii BFEA01000201 4 CH_cbr_8 7 10 0.00000000000000203895
Carpinus fangiana Cfa01 4 CH_cfa_189 4 7 0.0000143592
Eucalyptus grandis Chr02 4 CH_egr_702 4 9 0.0000650135
Fragaria x ananassa Fvb1-3 4 CH_fan_171 4 4 0.000000395556
Fragaria vesca Fvb1 4 CH_fve_338 3 4 0.000459678
Fragaria vesca Fvb6 4 CH_fve_95 5 7 0.00000000491914
Glycine max Gm06 4 CH_gma_452 3 3 0.000479341
Glycine max Gm09 4 CH_gma_453 3 3 0.000479341
Helianthus annuus HanXRQChr11 4 CH_han_418 5 21 0.0000249968
Helianthus annuus HanXRQChr14 4 CH_han_70 7 8 0.0000000000000335363
Lupinus albus Lalb_Chr07 4 CH_lal_319 3 3 0.000267834
Malus domestica Chr02 4 CH_mdo_233 4 4 0.000000272193
Pisum sativum chr7LG7 4 CH_psa_305 4 13 0.000309198
Quercus lobata 3 4 CH_qlo_487 4 4 0.000000475081
Quercus lobata CM012294 4 CH_qlo_869 3 3 0.000259193
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_283 4 4 0.000000164322
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_430 4 8 0.000011454
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_605 3 3 0.000124902
Rhododendron simsii chr07 4 CH_rsi_491 3 4 0.00061897
Sequoiadendron giganteum chr3 4 CH_sgi_1304 3 3 0.000524862
Sequoiadendron giganteum chr4 4 CH_sgi_325 7 12 0.0000000000106089
Selenicereus undatus Scaffold_19641 4 CH_sun_41 4 4 0.000000171512
Trochodendron aralioides group0 4 CH_tar_176 4 5 0.00000147545
Theobroma cacao Chromosome_3 4 CH_tca_379 3 4 0.000710295
Vanilla planifolia CM028153.1 4 CH_vpl_91 5 14 0.000000332009
Vitis vinifera chr19 4 CH_vvi_343 3 3 0.000240573
Zea mays 10 4 CH_zma_95 5 9 0.000000103444

Available child term results

Ontology identifier Description Number of clusters
GO:0004028 3-chloroallyl aldehyde dehydrogenase activity 2
GO:0004029 aldehyde dehydrogenase (NAD+) activity 6
GO:0004350 glutamate-5-semialdehyde dehydrogenase activity 2
GO:0004491 methylmalonate-semialdehyde dehydrogenase (acylating) activity 78
GO:0004777 succinate-semialdehyde dehydrogenase (NAD+) activity 2
GO:0008802 betaine-aldehyde dehydrogenase activity 4
GO:0008863 formate dehydrogenase (NAD+) activity 12
GO:0008883 glutamyl-tRNA reductase activity 12
GO:0008886 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity 10
GO:0016621 cinnamoyl-CoA reductase activity 20
GO:0018479 benzaldehyde dehydrogenase (NAD+) activity 66
GO:0033721 aldehyde dehydrogenase (NADP+) activity 6
GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity 2
GO:0050062 long-chain-fatty-acyl-CoA reductase activity 18
GO:0050269 coniferyl-aldehyde dehydrogenase activity 24
GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity 214
GO:0102965 alcohol-forming fatty acyl-CoA reductase activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001