Functional clusters

Information

  • Type Gene Ontology
  • Description methylmalonate-semialdehyde dehydrogenase (acylating) activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 3 CH_acertr_190 3 4 0.00000166964
Avicennia marina ScioBoG_26180_HRSCAF_26306 3 CH_ama_61 2 2 0.0000862218
Camellia sinensis var. sinensis Chr1 3 CH_camsi_303 3 4 0.000000441527
Camellia sinensis var. sinensis Chr3 3 CH_camsi_858 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold504 3 CH_can_170 3 3 0.000000204743
Corylus avellana 9 3 CH_cav_109 3 4 0.000000141073
Chara braunii BFEA01000319 3 CH_cbr_154 2 4 0.00043153
Coffea canephora chr7 3 CH_ccan_107 3 27 0.000000795718
Carpinus fangiana Cfa02 3 CH_cfa_265 2 2 0.000227204
Corchorus olitorius AWUE01019532.1 3 CH_col_81 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_2587 3 CH_cqu_181 3 4 0.000000471431
Davidia involucrata GWHABJS00000002 3 CH_din_401 2 2 0.000750188
Durio zibethinus NW_019168048.1 3 CH_dzi_270 2 2 0.000278093
Eucalyptus grandis Chr09 3 CH_egr_677 2 2 0.0000585274
Erythranthe guttata scaffold_2 3 CH_egut_324 2 3 0.000218436
Fragaria x ananassa Fvb4-1 3 CH_fan_552 2 2 0.000832663
Fragaria vesca Fvb2 3 CH_fve_193 3 5 0.00000624462
Gossypium hirsutum A03 3 CH_ghi_618 2 2 0.000560733
Gossypium hirsutum D02 3 CH_ghi_619 2 2 0.000560733
Gossypium raimondii Chr05 3 CH_gra_253 2 2 0.000160832
Helianthus annuus HanXRQChr03 3 CH_han_583 2 2 0.000231857
Nelumbo nucifera chr5 3 CH_nnu_258 2 2 0.00028901
Olea europaea chr15 3 CH_oeu_355 2 2 0.000800683
Punica granatum NC_045128.1 3 CH_pgr_319 2 2 0.000225107
Prunus persica Pp08 3 CH_ppe_455 2 3 0.000671324
Populus trichocarpa Chr09 3 CH_ptr_423 2 2 0.000578001
Quercus lobata 11 3 CH_qlo_892 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_183 4 11 0.000000000940543
Rhododendron simsii chr05 3 CH_rsi_504 2 2 0.000645307
Salvia bowleyana GWHASIU00000002 3 CH_sbo_394 3 46 0.000188223
Salix brachista GWHAAZH00000009 3 CH_sbr_285 2 2 0.000189042
Solanum tuberosum ST4.03ch01 3 CH_stu_382 2 2 0.0000512453
Selenicereus undatus Scaffold_33676 3 CH_sun_95 2 2 0.0000726639
Theobroma cacao Chromosome_2 3 CH_tca_325 2 2 0.000219716
Tarenaya hassleriana NW_010963495.1 3 CH_tha_123 2 3 0.000209534
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_390 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_391 2 2 0.000929238
Vitis vinifera chr3 3 CH_vvi_328 2 2 0.000228189
Zea mays 7 3 CH_zma_193 2 2 0.0000511313
Acer truncatum chr6 4 CH_acertr_190 3 4 0.00000166964
Avicennia marina ScioBoG_26180_HRSCAF_26306 4 CH_ama_61 2 2 0.0000862218
Camellia sinensis var. sinensis Chr1 4 CH_camsi_303 3 4 0.000000441527
Camellia sinensis var. sinensis Chr3 4 CH_camsi_858 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold504 4 CH_can_170 3 3 0.000000204743
Corylus avellana 9 4 CH_cav_109 3 4 0.000000141073
Chara braunii BFEA01000319 4 CH_cbr_154 2 4 0.00043153
Coffea canephora chr7 4 CH_ccan_107 3 27 0.000000795718
Carpinus fangiana Cfa02 4 CH_cfa_265 2 2 0.000227204
Corchorus olitorius AWUE01019532.1 4 CH_col_81 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_2587 4 CH_cqu_181 3 4 0.000000471431
Davidia involucrata GWHABJS00000002 4 CH_din_401 2 2 0.000750188
Durio zibethinus NW_019168048.1 4 CH_dzi_270 2 2 0.000278093
Eucalyptus grandis Chr09 4 CH_egr_677 2 2 0.0000585274
Erythranthe guttata scaffold_2 4 CH_egut_324 2 3 0.000218436
Fragaria x ananassa Fvb4-1 4 CH_fan_552 2 2 0.000832663
Fragaria vesca Fvb2 4 CH_fve_193 3 5 0.00000624462
Gossypium hirsutum A03 4 CH_ghi_618 2 2 0.000560733
Gossypium hirsutum D02 4 CH_ghi_619 2 2 0.000560733
Gossypium raimondii Chr05 4 CH_gra_253 2 2 0.000160832
Helianthus annuus HanXRQChr03 4 CH_han_583 2 2 0.000231857
Nelumbo nucifera chr5 4 CH_nnu_258 2 2 0.00028901
Olea europaea chr15 4 CH_oeu_355 2 2 0.000800683
Punica granatum NC_045128.1 4 CH_pgr_319 2 2 0.000225107
Prunus persica Pp08 4 CH_ppe_455 2 3 0.000671324
Populus trichocarpa Chr09 4 CH_ptr_423 2 2 0.000578001
Quercus lobata 11 4 CH_qlo_892 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_183 4 11 0.000000000940543
Rhododendron simsii chr05 4 CH_rsi_504 2 2 0.000645307
Salvia bowleyana GWHASIU00000002 4 CH_sbo_394 3 46 0.000188223
Salix brachista GWHAAZH00000009 4 CH_sbr_285 2 2 0.000189042
Solanum tuberosum ST4.03ch01 4 CH_stu_382 2 2 0.0000512453
Selenicereus undatus Scaffold_33676 4 CH_sun_95 2 2 0.0000726639
Theobroma cacao Chromosome_2 4 CH_tca_325 2 2 0.000219716
Tarenaya hassleriana NW_010963495.1 4 CH_tha_123 2 3 0.000209534
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_390 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_391 2 2 0.000929238
Vitis vinifera chr3 4 CH_vvi_328 2 2 0.000228189
Zea mays 7 4 CH_zma_193 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001