Functional clusters
Information
- Type Gene Ontology
- Description benzaldehyde dehydrogenase (NAD+) activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_154 | 3 | 7 | 0.000000260888 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_485 | 2 | 2 | 0.000089815 |
| Amborella trichopoda | AmTr_v1.0_scaffold00004 | 3 | CH_atr_286 | 2 | 2 | 0.000476644 |
| Cannabis sativa | NC_044375.1 | 3 | CH_cansat_97 | 3 | 4 | 0.0000000258707 |
| Capsicum annuum | PGAv.1.6.scaffold439 | 3 | CH_can_77 | 5 | 19 | 0.00000000000406035 |
| Cicer arietinum L. | Ca_LG2_v3 | 3 | CH_car_139 | 2 | 3 | 0.000233481 |
| Coffea canephora | chr1 | 3 | CH_ccan_108 | 3 | 16 | 0.000000853115 |
| Coffea canephora | chr0 | 3 | CH_ccan_137 | 3 | 29 | 0.00000350355 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_127 | 3 | 3 | 0.0000000100941 |
| Cucumis sativus L. | chr4 | 3 | CH_csa_183 | 2 | 2 | 0.0000834759 |
| Durio zibethinus | NW_019168159.1 | 3 | CH_dzi_52 | 4 | 6 | 0.0000000000224024 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_394 | 2 | 3 | 0.000403835 |
| Erythranthe guttata | scaffold_4 | 3 | CH_egut_269 | 2 | 2 | 0.0000728147 |
| Glycine max | Gm02 | 3 | CH_gma_408 | 2 | 3 | 0.000341591 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_370 | 2 | 3 | 0.000964932 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_511 | 2 | 3 | 0.000115926 |
| Lotus japonicus | Contig00564 | 3 | CH_lja_93 | 3 | 5 | 0.0000000766976 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_22 | 11 | 24 | 4.50486e-30 |
| Malus domestica | Chr11 | 3 | CH_mdo_537 | 2 | 2 | 0.000227527 |
| Medicago truncatula | chr5 | 3 | CH_mtr_539 | 2 | 3 | 0.000123256 |
| Petunia axillaris | Peaxi162Scf00217 | 3 | CH_pax_241 | 2 | 2 | 0.000211067 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_253 | 2 | 2 | 0.0000750356 |
| Pisum sativum | chr2LG1 | 3 | CH_psa_213 | 2 | 2 | 0.0000521635 |
| Phaseolus vulgaris | Chr08 | 3 | CH_pvu_228 | 2 | 2 | 0.0000734727 |
| Simmondsia chinensis | GWHAASQ00000006 | 3 | CH_sci_268 | 2 | 2 | 0.000851426 |
| Solanum lycopersicum | SL4.0ch11 | 3 | CH_sly_84 | 4 | 4 | 0.0000000000212329 |
| Solanum pennellii | Spenn-ch11 | 3 | CH_spe_52 | 4 | 4 | 0.00000000000924027 |
| Theobroma cacao | Chromosome_9 | 3 | CH_tca_66 | 4 | 6 | 0.0000000000176786 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_756 | 3 | CH_tpr_318 | 2 | 4 | 0.00045415 |
| Tripterygium wilfordii | NC_052253.1 | 3 | CH_twi_296 | 2 | 3 | 0.000502069 |
| Vigna mungo | CM024073.1 | 3 | CH_vmu_163 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr18 | 3 | CH_vvi_153 | 3 | 4 | 0.00000013885 |
| Zea mays | 1 | 3 | CH_zma_124 | 3 | 5 | 0.000000784212 |
| Acer truncatum | chr3 | 4 | CH_acertr_154 | 3 | 7 | 0.000000260888 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_485 | 2 | 2 | 0.000089815 |
| Amborella trichopoda | AmTr_v1.0_scaffold00004 | 4 | CH_atr_286 | 2 | 2 | 0.000476644 |
| Cannabis sativa | NC_044375.1 | 4 | CH_cansat_97 | 3 | 4 | 0.0000000258707 |
| Capsicum annuum | PGAv.1.6.scaffold439 | 4 | CH_can_77 | 5 | 19 | 0.00000000000406035 |
| Cicer arietinum L. | Ca_LG2_v3 | 4 | CH_car_139 | 2 | 3 | 0.000233481 |
| Coffea canephora | chr1 | 4 | CH_ccan_108 | 3 | 16 | 0.000000853115 |
| Coffea canephora | chr0 | 4 | CH_ccan_137 | 3 | 29 | 0.00000350355 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_127 | 3 | 3 | 0.0000000100941 |
| Cucumis sativus L. | chr4 | 4 | CH_csa_183 | 2 | 2 | 0.0000834759 |
| Durio zibethinus | NW_019168159.1 | 4 | CH_dzi_52 | 4 | 6 | 0.0000000000224024 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_394 | 2 | 3 | 0.000403835 |
| Erythranthe guttata | scaffold_4 | 4 | CH_egut_269 | 2 | 2 | 0.0000728147 |
| Glycine max | Gm02 | 4 | CH_gma_408 | 2 | 3 | 0.000341591 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_370 | 2 | 3 | 0.000964932 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_511 | 2 | 3 | 0.000115926 |
| Lotus japonicus | Contig00564 | 4 | CH_lja_93 | 3 | 5 | 0.0000000766976 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_22 | 11 | 24 | 4.50486e-30 |
| Malus domestica | Chr11 | 4 | CH_mdo_537 | 2 | 2 | 0.000227527 |
| Medicago truncatula | chr5 | 4 | CH_mtr_539 | 2 | 3 | 0.000123256 |
| Petunia axillaris | Peaxi162Scf00217 | 4 | CH_pax_241 | 2 | 2 | 0.000211067 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_253 | 2 | 2 | 0.0000750356 |
| Pisum sativum | chr2LG1 | 4 | CH_psa_213 | 2 | 2 | 0.0000521635 |
| Phaseolus vulgaris | Chr08 | 4 | CH_pvu_228 | 2 | 2 | 0.0000734727 |
| Simmondsia chinensis | GWHAASQ00000006 | 4 | CH_sci_268 | 2 | 2 | 0.000851426 |
| Solanum lycopersicum | SL4.0ch11 | 4 | CH_sly_84 | 4 | 4 | 0.0000000000212329 |
| Solanum pennellii | Spenn-ch11 | 4 | CH_spe_52 | 4 | 4 | 0.00000000000924027 |
| Theobroma cacao | Chromosome_9 | 4 | CH_tca_66 | 4 | 6 | 0.0000000000176786 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_756 | 4 | CH_tpr_318 | 2 | 4 | 0.00045415 |
| Tripterygium wilfordii | NC_052253.1 | 4 | CH_twi_296 | 2 | 3 | 0.000502069 |
| Vigna mungo | CM024073.1 | 4 | CH_vmu_163 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr18 | 4 | CH_vvi_153 | 3 | 4 | 0.00000013885 |
| Zea mays | 1 | 4 | CH_zma_124 | 3 | 5 | 0.000000784212 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |