Functional clusters

Information

  • Type Gene Ontology
  • Description energy derivation by oxidation of organic compounds

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1 3 CH_can_436 4 11 0.000533868
Populus trichocarpa Chr07 3 CH_ptr_79 11 49 0.000000000000279103
Capsicum annuum PGAv.1.6.scaffold1 4 CH_can_436 4 11 0.000533868
Populus trichocarpa Chr07 4 CH_ptr_79 11 49 0.000000000000279103

Available child term results

Ontology identifier Description Number of clusters
GO:0006099 tricarboxylic acid cycle 4
GO:0006119 oxidative phosphorylation 6
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 4
GO:0006121 mitochondrial electron transport, succinate to ubiquinone 2
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 8
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 22
GO:0009060 aerobic respiration 4
GO:0009061 anaerobic respiration 16
GO:0010230 alternative respiration 18
GO:0010478 chlororespiration 2
GO:0022904 respiratory electron transport chain 6
GO:0042773 ATP synthesis coupled electron transport 8
GO:0042775 mitochondrial ATP synthesis coupled electron transport 4
GO:0045333 cellular respiration 12

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001