Functional clusters
Information
- Type Gene Ontology
- Description aerobic respiration
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Sapria himalayana | scaffold25_7721883 | 3 | CH_shi_105 | 3 | 3 | 0.0000047525 |
Sapria himalayana | scaffold62_2896931 | 3 | CH_shi_106 | 3 | 3 | 0.0000047525 |
Sapria himalayana | scaffold25_7721883 | 4 | CH_shi_105 | 3 | 3 | 0.0000047525 |
Sapria himalayana | scaffold62_2896931 | 4 | CH_shi_106 | 3 | 3 | 0.0000047525 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0006099 | tricarboxylic acid cycle | 4 |
GO:0006119 | oxidative phosphorylation | 6 |
GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | 4 |
GO:0006121 | mitochondrial electron transport, succinate to ubiquinone | 2 |
GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | 8 |
GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | 22 |
GO:0010230 | alternative respiration | 18 |
GO:0042773 | ATP synthesis coupled electron transport | 8 |
GO:0042775 | mitochondrial ATP synthesis coupled electron transport | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |