Functional clusters

Information

  • Type Gene Ontology
  • Description tissue development

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Simmondsia chinensis GWHAASQ00000013 3 CH_sci_252 6 10 0.000605749
Simmondsia chinensis GWHAASQ00000013 4 CH_sci_252 6 10 0.000605749

Available child term results

Ontology identifier Description Number of clusters
GO:0001736 establishment of planar polarity 2
GO:0009913 epidermal cell differentiation 2
GO:0009933 meristem structural organization 2
GO:0009957 epidermal cell fate specification 4
GO:0009960 endosperm development 16
GO:0010026 trichome differentiation 2
GO:0010052 guard cell differentiation 4
GO:0010054 trichoblast differentiation 2
GO:0010063 positive regulation of trichoblast fate specification 2
GO:0010071 root meristem specification 6
GO:0010073 meristem maintenance 8
GO:0010074 maintenance of meristem identity 2
GO:0010077 maintenance of inflorescence meristem identity 2
GO:0010082 regulation of root meristem growth 2
GO:0010087 phloem or xylem histogenesis 4
GO:0010088 phloem development 178
GO:0010089 xylem development 6
GO:0010090 trichome morphogenesis 12
GO:0010091 trichome branching 2
GO:0010235 guard mother cell cytokinesis 2
GO:0010374 stomatal complex development 4
GO:0010440 stomatal lineage progression 4
GO:0010442 guard cell morphogenesis 22
GO:0010448 vegetative meristem growth 2
GO:0010479 stele development 4
GO:0010492 maintenance of shoot apical meristem identity 2
GO:0010582 floral meristem determinacy 2
GO:0035266 meristem growth 2
GO:0035987 endodermal cell differentiation 6
GO:0045604 regulation of epidermal cell differentiation 6
GO:0048507 meristem development 46
GO:0048509 regulation of meristem development 2
GO:0048510 regulation of timing of transition from vegetative to reproductive phase 2
GO:0048629 trichome patterning 8
GO:0048767 root hair elongation 12
GO:0048768 root hair cell tip growth 4
GO:0080147 root hair cell development 4
GO:0090058 metaxylem development 2
GO:0090059 protoxylem development 16
GO:0090421 embryonic meristem initiation 8
GO:0090437 socket cell differentiation 4
GO:0090506 axillary shoot meristem initiation 6
GO:0090626 plant epidermis morphogenesis 2
GO:1900032 regulation of trichome patterning 4
GO:1902182 shoot apical meristem development 10
GO:1902183 regulation of shoot apical meristem development 2
GO:1902184 negative regulation of shoot apical meristem development 2
GO:1902892 positive regulation of root hair elongation 2
GO:1903224 regulation of endodermal cell differentiation 2
GO:1905499 trichome papilla formation 8
GO:2000123 positive regulation of stomatal complex development 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001