Functional clusters

Information

  • Type Gene Ontology
  • Description anatomical structure morphogenesis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 3 CH_aag_153 16 66 0.000372706
Sechium edule LG03 3 CH_sed_150 11 24 0.000031518
Selaginella moellendorffii scaffold_13 3 CH_smo_179 15 69 0.000621739
Anthoceros agrestis Sc2ySwM_344 4 CH_aag_153 16 66 0.000372706
Sechium edule LG03 4 CH_sed_150 11 24 0.000031518
Selaginella moellendorffii scaffold_13 4 CH_smo_179 15 69 0.000621739

Available child term results

Ontology identifier Description Number of clusters
GO:0000769 syncytium formation by mitosis without cytokinesis 26
GO:0000902 cell morphogenesis 14
GO:0001736 establishment of planar polarity 2
GO:0006949 syncytium formation 2
GO:0009826 unidimensional cell growth 4
GO:0009860 pollen tube growth 14
GO:0009877 nodulation 2
GO:0009933 meristem structural organization 2
GO:0010016 shoot system morphogenesis 2
GO:0010052 guard cell differentiation 4
GO:0010054 trichoblast differentiation 2
GO:0010063 positive regulation of trichoblast fate specification 2
GO:0010064 embryonic shoot morphogenesis 4
GO:0010071 root meristem specification 6
GO:0010082 regulation of root meristem growth 2
GO:0010086 embryonic root morphogenesis 12
GO:0010090 trichome morphogenesis 12
GO:0010091 trichome branching 2
GO:0010094 specification of carpel identity 6
GO:0010097 specification of stamen identity 6
GO:0010102 lateral root morphogenesis 8
GO:0010199 organ boundary specification between lateral organs and the meristem 2
GO:0010223 secondary shoot formation 2
GO:0010234 anther wall tapetum cell fate specification 12
GO:0010311 lateral root formation 6
GO:0010338 leaf formation 2
GO:0010434 bract formation 6
GO:0010442 guard cell morphogenesis 22
GO:0010584 pollen exine formation 8
GO:0010588 cotyledon vascular tissue pattern formation 4
GO:0010618 aerenchyma formation 42
GO:0010622 specification of ovule identity 2
GO:0022603 regulation of anatomical structure morphogenesis 4
GO:0035987 endodermal cell differentiation 6
GO:0045765 regulation of angiogenesis 6
GO:0048283 indeterminate inflorescence morphogenesis 2
GO:0048314 embryo sac morphogenesis 10
GO:0048317 seed morphogenesis 4
GO:0048439 flower morphogenesis 2
GO:0048444 floral organ morphogenesis 6
GO:0048446 petal morphogenesis 2
GO:0048449 floral organ formation 2
GO:0048451 petal formation 2
GO:0048461 flower structural organization 8
GO:0048462 carpel formation 4
GO:0048482 plant ovule morphogenesis 2
GO:0048530 fruit morphogenesis 2
GO:0048532 anatomical structure arrangement 2
GO:0048654 anther morphogenesis 18
GO:0048767 root hair elongation 12
GO:0048768 root hair cell tip growth 4
GO:0051510 regulation of unidimensional cell growth 2
GO:0051511 negative regulation of unidimensional cell growth 8
GO:0051512 positive regulation of unidimensional cell growth 2
GO:0051513 regulation of monopolar cell growth 12
GO:0060560 developmental growth involved in morphogenesis 2
GO:0060776 simple leaf morphogenesis 6
GO:0060777 compound leaf morphogenesis 8
GO:0080110 sporopollenin biosynthetic process 4
GO:0080147 root hair cell development 4
GO:0080159 zygote elongation 20
GO:0080181 lateral root branching 6
GO:0090421 embryonic meristem initiation 8
GO:0090451 cotyledon boundary formation 2
GO:0090470 shoot organ boundary specification 4
GO:0090506 axillary shoot meristem initiation 6
GO:0090626 plant epidermis morphogenesis 2
GO:0090698 post-embryonic plant morphogenesis 2
GO:0090701 specification of plant organ identity 4
GO:0090709 regulation of timing of plant organ formation 10
GO:1901371 regulation of leaf morphogenesis 2
GO:1902892 positive regulation of root hair elongation 2
GO:1903224 regulation of endodermal cell differentiation 2
GO:1904961 quiescent center organization 2
GO:1905393 plant organ formation 2
GO:1905421 regulation of plant organ morphogenesis 2
GO:1905499 trichome papilla formation 8
GO:2000025 regulation of leaf formation 2
GO:2000032 regulation of secondary shoot formation 4
GO:2000769 regulation of establishment or maintenance of cell polarity regulating cell shape 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001