Functional clusters
Information
- Type Gene Ontology
- Description cell morphogenesis
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-1 | 3 | CH_aar_247 | 7 | 40 | 0.000552866 |
Actinidia chinensis | Lachesis_group4 | 3 | CH_ach_134 | 4 | 4 | 0.0000681561 |
Brassica carinata | ChrC02 | 3 | CH_bca_456 | 8 | 61 | 0.0000185003 |
Brassica napus | A05 | 3 | CH_bna_618 | 5 | 17 | 0.000550378 |
Brassica rapa | A05 | 3 | CH_bra_220 | 6 | 26 | 0.000200126 |
Capsicum annuum | PGAv.1.6.scaffold497 | 3 | CH_can_111 | 7 | 11 | 0.00000000249592 |
Sapria himalayana | scaffold85_1789505 | 3 | CH_shi_123 | 5 | 15 | 0.000017719 |
Aethionema arabicum | LG-1 | 4 | CH_aar_247 | 7 | 40 | 0.000552866 |
Actinidia chinensis | Lachesis_group4 | 4 | CH_ach_134 | 4 | 4 | 0.0000681561 |
Brassica carinata | ChrC02 | 4 | CH_bca_456 | 8 | 61 | 0.0000185003 |
Brassica napus | A05 | 4 | CH_bna_618 | 5 | 17 | 0.000550378 |
Brassica rapa | A05 | 4 | CH_bra_220 | 6 | 26 | 0.000200126 |
Capsicum annuum | PGAv.1.6.scaffold497 | 4 | CH_can_111 | 7 | 11 | 0.00000000249592 |
Sapria himalayana | scaffold85_1789505 | 4 | CH_shi_123 | 5 | 15 | 0.000017719 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0009826 | unidimensional cell growth | 4 |
GO:0009860 | pollen tube growth | 14 |
GO:0010090 | trichome morphogenesis | 12 |
GO:0010091 | trichome branching | 2 |
GO:0010442 | guard cell morphogenesis | 22 |
GO:0048768 | root hair cell tip growth | 4 |
GO:0051510 | regulation of unidimensional cell growth | 2 |
GO:0051511 | negative regulation of unidimensional cell growth | 8 |
GO:0051512 | positive regulation of unidimensional cell growth | 2 |
GO:0051513 | regulation of monopolar cell growth | 12 |
GO:0080159 | zygote elongation | 20 |
GO:1905499 | trichome papilla formation | 8 |
GO:2000769 | regulation of establishment or maintenance of cell polarity regulating cell shape | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |