Functional clusters

Information

  • Type Gene Ontology
  • Description response to red or far red light

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum A08 3 CH_ghi_440 7 58 0.000114264
Gossypium hirsutum A08 4 CH_ghi_440 7 58 0.000114264

Available child term results

Ontology identifier Description Number of clusters
GO:0009585 red, far-red light phototransduction 4
GO:0009704 de-etiolation 2
GO:0010018 far-red light signaling pathway 6
GO:0010099 regulation of photomorphogenesis 4
GO:0010114 response to red light 2
GO:0010201 response to continuous far red light stimulus by the high-irradiance response system 2
GO:0010202 response to low fluence red light stimulus 4
GO:0010203 response to very low fluence red light stimulus 6
GO:0010218 response to far red light 4
GO:0071490 cellular response to far red light 98
GO:0090227 regulation of red or far-red light signaling pathway 4
GO:0090228 positive regulation of red or far-red light signaling pathway 14
GO:1902446 regulation of shade avoidance 6
GO:2000030 regulation of response to red or far red light 2
GO:2000306 positive regulation of photomorphogenesis 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001